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Protein Overview: FBpp0297671, FBp...

General Information:
Name(s) found: FBpp0297677 [FlyBase]
FBpp0297676 [FlyBase]
FBpp0297671 [FlyBase]
Description(s) found:
Found 35 descriptions.
SHOW ALL
  • type=protein; loc=3R:complement(19013166..19013525,19013599..19014851,19017418..19017505,19017563..19018003,19023009..19023557,19023622..19023698,19035064..19035142,19035330..19035605,19043601..19044629); ID=FBpp0297677; name=cnc-PK; parent=FBgn0262975,FBtr0306754; dbxref=REFSEQ:NP_001247260,GB_protein:AFH06578,FlyBase:FBpp0297677,FlyBase_Annotation_IDs:CG43286-PK; MD5=272453312cad5eaa96c50f7baf9a7bee; length=1383; release=r5.56; species=Dmel; [FlyBase]
  • type=protein; loc=3R:complement(19013166..19013525,19013599..19014851,19017418..19017505,19017563..19018003,19023009..19023557,19023622..19023698,19035064..19035142,19035330..19035605,19043601..19044629); ID=FBpp0297676; name=cnc-PJ; parent=FBgn0262975,FBtr0306753; dbxref=REFSEQ:NP_001247259,GB_protein:AFH06577,FlyBase:FBpp0297676,FlyBase_Annotation_IDs:CG43286-PJ; MD5=272453312cad5eaa96c50f7baf9a7bee; length=1383; release=r5.56; species=Dmel; [FlyBase]
  • type=protein; loc=3R:complement(19013166..19013525,19013599..19014851,19017418..19017505,19017563..19018003,19023009..19023557,19023622..19023698,19035064..19035142,19035330..19035605,19043601..19044629); ID=FBpp0297671; name=cnc-PC; parent=FBgn0262975,FBtr0306748; dbxref=REFSEQ:NP_732833,GB_protein:AAF56111,FlyBase:FBpp0297671,FlyBase:FBpp0083784,FlyBase_Annotation_IDs:CG17894-PC,FlyBase_Annotation_IDs:CG43286-PC; MD5=272453312cad5eaa96c50f7baf9a7bee; length=1383; release=r5.56; species=Dmel; [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 1383 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA][NAS]
    Biological Process: maintenance of oocyte nucleus location involved in oocyte dorsal/ventral axis specification [IMP]
    regulation of pole plasm oskar mRNA localization [IMP]
    bicoid mRNA localization [IMP]
    blastoderm segmentation [IMP]
    pole plasm oskar mRNA localization [IMP]
    oocyte microtubule cytoskeleton polarization [IMP]
    regulation of transcription, DNA-dependent [IEA]
    oocyte dorsal/ventral axis specification [IMP]
    regulation of transcription [IEA]
    regulation of bicoid mRNA localization [IMP]
    Molecular Function: DNA binding [IMP]
    transcription factor activity [IEA][TAS]
    RNA polymerase II transcription factor activity [NAS]
    protein heterodimerization activity [ISS]
    sequence-specific DNA binding [IEA]
    protein dimerization activity [IEA]
    transcription activator activity [TAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISNKKSYAM KMLQLALALS LLHYNPDYLL HRWDSQLELG THGDGWELEM LRTVHRLDMD  60
   61 HNPYGNRKGL SPRIEDLLNF DDPSLGGMAN GIGGCKLPPR FNGSTFVMNL HNTTGNSSVQ 120
  121 TAALQDVQST SAAATGGTMV VGTGGAPTSG GQTSGSALGE IHIDTASLDP GNANHSPLHP 180
  181 TSELDTFLTP HALQDQRSIW EQNLADLYDY NDLSLQTSPY ANLPLKDGQP QPSNSSHLDL 240
  241 SLAALLHGFT GGSGAPLSTA ALNDSTPHPR NLGSVTNNSA GRSDDGEESL YLGRLFGEDE 300
  301 DEDYEGELIG GVANACEVEG LTTDEPFGSN CFANEVEIGD DEEESEIAEV LYKQDVDLGF 360
  361 SLDQEAIINA SYASGNSAAT NVKSKPEDET KSSDPSISES SGFKDTDVNA ENEASAASVD 420
  421 DIEKLKALEE LQQDKDKNNE NQLEDITNEW NGIPFTIDNE TGEYIRLPLD ELLNDVLKLS 480
  481 EFPLQDDLSN DPVASTSQAA AAFNENQAQR IVSETGEDLL SGEGISSKQN RNEAKNKDND 540
  541 PEKADGDSFS VSDFEELQNS VGSPLFDLDE DAKKELDEML QSAVPSYHHP HPHHGHPHAH 600
  601 PHSHHHASMH HAHAHHAAAA AAAHQRAVQQ ANYGGGVGVG VGVGVGVGSG TGSAFQRQPA 660
  661 AGGFHHGHHQ GRMPRLNRSV SMERLQDFAT YFSPIPSMVG GVSDMSPYPH HYPGYSYQAS 720
  721 PSNGAPGTPG QHGQYGSGAN ATLQPPPPPP PPHHAAMLHH PNAALGDICP TGQPHYGHNL 780
  781 GSAVTSSMHL TNSSHEADGA AAAAAAYKVE HDLMYYGNTS SDINQTDGFI NSIFTDEDLH 840
  841 LMDMNESFCR MVDNSTSNNS SVLGLPSSGH VSNGSGSSAQ LGAGNPHGNQ ANGASGGVGS 900
  901 MSGSAVGAGA TGMTADLLAS GGAGAQGGAD RLDASSDSAV SSMGSERVPS LSDGEWGEGS 960
  961 DSAQDYHQGK YGGPYDFSYN NNSRLSTATR QPPVAQKKHQ LYGKRDPHKQ TPSALPPTAP1020
 1021 PAAATAVQSQ SIKYEYDAGY ASSGMASGGI SEPGAMGPAL SKDYHHHQPY GMGASGSAFS1080
 1081 GDYTVRPSPR TSQDLVQLNH TYSLPQGSGS LPRPQARDKK PLVATKTASK GASAGNSSSV1140
 1141 GGNSSNLEEE HLTRDEKRAR SLNIPISVPD IINLPMDEFN ERLSKYDLSE NQLSLIRDIR1200
 1201 RRGKNKVAAQ NCRKRKLDQI LTLEDEVNAV VKRKTQLNQD RDHLESERKR ISNKFAMLHR1260
 1261 HVFQYLRDPE GNPCSPADYS LQQAADGSVY LLPREKSEGN NTATAASNAV SSASGGSLNG1320
 1321 HVPTQAPMHS HQSHGMQAQH VVGGMSQQQQ QQSRLPPHLQ QQHHLQSQQQ QPGGQQQQQH1380
 1381 RKE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..146] deduced N/A No confident structure predictions are available.
    2 View Details [147..384] deduced N/A No confident structure predictions are available.
    3 View Details [385..566] deduced N/A No confident structure predictions are available.
    4 View Details [567..732] MSA 1.334996 View MSA. No confident structure predictions are available.
    5 View Details [733..953] PSI-BLAST 5.0 Sec24
    6 View Details [954..1022] deduced N/A No confident structure predictions are available.
    7 View Details [1023..1152] MSA 1.279996 View MSA. No confident structure predictions are available.
    8 View Details [1153..1187] FFAS03 1.85 Skn-1
    9 View Details [1188..1267] PSI-BLAST 7.69897 C/ebp beta
    10 View Details [1268..1383] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.
    6 No functions predicted.
    7 No functions predicted.
    8
    Term Confidence Notes
  • binding
    		•  3.16116926111366 bayes_pls_golite062009
  • transcription regulator activity
    		•  2.56809196773333 bayes_pls_golite062009
  • DNA binding
    		•  2.51449794308849 bayes_pls_golite062009
  • nucleic acid binding
    		•  2.33205906020933 bayes_pls_golite062009
  • transcription factor activity
    		•  2.10638151979258 bayes_pls_golite062009
  • protein binding
    		•  1.64791933694023 bayes_pls_golite062009
  • protein heterodimerization activity
    		•  0.735602594031742 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
    		•  0.483017958550706 bayes_pls_golite062009
  • protein dimerization activity
    		•  0.26737339325017 bayes_pls_golite062009
  • transcription activator activity
    		•  0.235928504008492 bayes_pls_golite062009
    9 No functions predicted.
    10 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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