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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FBpp0297671, FBp...
Protein type: Globular with Signal Peptide
Type Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISNKKSYAM KMLQLALALS LLHYNPDYLL HRWDSQLELG THGDGWELEM LRTVHRLDMD  60
   61 HNPYGNRKGL SPRIEDLLNF DDPSLGGMAN GIGGCKLPPR FNGSTFVMNL HNTTGNSSVQ 120
  121 TAALQDVQST SAAATGGTMV VGTGGAPTSG GQTSGSALGE IHIDTASLDP GNANHSPLHP 180
  181 TSELDTFLTP HALQDQRSIW EQNLADLYDY NDLSLQTSPY ANLPLKDGQP QPSNSSHLDL 240
  241 SLAALLHGFT GGSGAPLSTA ALNDSTPHPR NLGSVTNNSA GRSDDGEESL YLGRLFGEDE 300
  301 DEDYEGELIG GVANACEVEG LTTDEPFGSN CFANEVEIGD DEEESEIAEV LYKQDVDLGF 360
  361 SLDQEAIINA SYASGNSAAT NVKSKPEDET KSSDPSISES SGFKDTDVNA ENEASAASVD 420
  421 DIEKLKALEE LQQDKDKNNE NQLEDITNEW NGIPFTIDNE TGEYIRLPLD ELLNDVLKLS 480
  481 EFPLQDDLSN DPVASTSQAA AAFNENQAQR IVSETGEDLL SGEGISSKQN RNEAKNKDND 540
  541 PEKADGDSFS VSDFEELQNS VGSPLFDLDE DAKKELDEML QSAVPSYHHP HPHHGHPHAH 600
  601 PHSHHHASMH HAHAHHAAAA AAAHQRAVQQ ANYGGGVGVG VGVGVGVGSG TGSAFQRQPA 660
  661 AGGFHHGHHQ GRMPRLNRSV SMERLQDFAT YFSPIPSMVG GVSDMSPYPH HYPGYSYQAS 720
  721 PSNGAPGTPG QHGQYGSGAN ATLQPPPPPP PPHHAAMLHH PNAALGDICP TGQPHYGHNL 780
  781 GSAVTSSMHL TNSSHEADGA AAAAAAYKVE HDLMYYGNTS SDINQTDGFI NSIFTDEDLH 840
  841 LMDMNESFCR MVDNSTSNNS SVLGLPSSGH VSNGSGSSAQ LGAGNPHGNQ ANGASGGVGS 900
  901 MSGSAVGAGA TGMTADLLAS GGAGAQGGAD RLDASSDSAV SSMGSERVPS LSDGEWGEGS 960
  961 DSAQDYHQGK YGGPYDFSYN NNSRLSTATR QPPVAQKKHQ LYGKRDPHKQ TPSALPPTAP1020
 1021 PAAATAVQSQ SIKYEYDAGY ASSGMASGGI SEPGAMGPAL SKDYHHHQPY GMGASGSAFS1080
 1081 GDYTVRPSPR TSQDLVQLNH TYSLPQGSGS LPRPQARDKK PLVATKTASK GASAGNSSSV1140
 1141 GGNSSNLEEE HLTRDEKRAR SLNIPISVPD IINLPMDEFN ERLSKYDLSE NQLSLIRDIR1200
 1201 RRGKNKVAAQ NCRKRKLDQI LTLEDEVNAV VKRKTQLNQD RDHLESERKR ISNKFAMLHR1260
 1261 HVFQYLRDPE GNPCSPADYS LQQAADGSVY LLPREKSEGN NTATAASNAV SSASGGSLNG1320
 1321 HVPTQAPMHS HQSHGMQAQH VVGGMSQQQQ QQSRLPPHLQ QQHHLQSQQQ QPGGQQQQQH1380
 1381 RKE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle