| Protein: | FBpp0297671, FBp... |
| Organism: | Drosophila melanogaster |
| Length: | 1383 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0297671, FBp....
| Description | E-value | Query Range |
Subject Range |
|
|
1003.0 | [0..88] | [1346..1] |
|
Region A: Residues: [1-146] |
1 11 21 31 41 51
| | | | | |
1 MISNKKSYAM KMLQLALALS LLHYNPDYLL HRWDSQLELG THGDGWELEM LRTVHRLDMD 60
61 HNPYGNRKGL SPRIEDLLNF DDPSLGGMAN GIGGCKLPPR FNGSTFVMNL HNTTGNSSVQ 120
121 TAALQDVQST SAAATGGTMV VGTGGA
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [147-384] |
1 11 21 31 41 51
| | | | | |
1 PTSGGQTSGS ALGEIHIDTA SLDPGNANHS PLHPTSELDT FLTPHALQDQ RSIWEQNLAD 60
61 LYDYNDLSLQ TSPYANLPLK DGQPQPSNSS HLDLSLAALL HGFTGGSGAP LSTAALNDST 120
121 PHPRNLGSVT NNSAGRSDDG EESLYLGRLF GEDEDEDYEG ELIGGVANAC EVEGLTTDEP 180
181 FGSNCFANEV EIGDDEEESE IAEVLYKQDV DLGFSLDQEA IINASYASGN SAATNVKS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [385-566] |
1 11 21 31 41 51
| | | | | |
1 KPEDETKSSD PSISESSGFK DTDVNAENEA SAASVDDIEK LKALEELQQD KDKNNENQLE 60
61 DITNEWNGIP FTIDNETGEY IRLPLDELLN DVLKLSEFPL QDDLSNDPVA STSQAAAAFN 120
121 ENQAQRIVSE TGEDLLSGEG ISSKQNRNEA KNKDNDPEKA DGDSFSVSDF EELQNSVGSP 180
181 LF
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [567-732] |
1 11 21 31 41 51
| | | | | |
1 DLDEDAKKEL DEMLQSAVPS YHHPHPHHGH PHAHPHSHHH ASMHHAHAHH AAAAAAAHQR 60
61 AVQQANYGGG VGVGVGVGVG VGSGTGSAFQ RQPAAGGFHH GHHQGRMPRL NRSVSMERLQ 120
121 DFATYFSPIP SMVGGVSDMS PYPHHYPGYS YQASPSNGAP GTPGQH
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [733-953] |
1 11 21 31 41 51
| | | | | |
1 GQYGSGANAT LQPPPPPPPP HHAAMLHHPN AALGDICPTG QPHYGHNLGS AVTSSMHLTN 60
61 SSHEADGAAA AAAAYKVEHD LMYYGNTSSD INQTDGFINS IFTDEDLHLM DMNESFCRMV 120
121 DNSTSNNSSV LGLPSSGHVS NGSGSSAQLG AGNPHGNQAN GASGGVGSMS GSAVGAGATG 180
181 MTADLLASGG AGAQGGADRL DASSDSAVSS MGSERVPSLS D
|
| Detection Method: | |
| Confidence: | 5.0 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [954-1022] |
1 11 21 31 41 51
| | | | | |
1 GEWGEGSDSA QDYHQGKYGG PYDFSYNNNS RLSTATRQPP VAQKKHQLYG KRDPHKQTPS 60
61 ALPPTAPPA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1023-1152] |
1 11 21 31 41 51
| | | | | |
1 AATAVQSQSI KYEYDAGYAS SGMASGGISE PGAMGPALSK DYHHHQPYGM GASGSAFSGD 60
61 YTVRPSPRTS QDLVQLNHTY SLPQGSGSLP RPQARDKKPL VATKTASKGA SAGNSSSVGG 120
121 NSSNLEEEHL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1153-1187] |
1 11 21 31 41 51
| | | | | |
1 TRDEKRARSL NIPISVPDII NLPMDEFNER LSKYD
|
| Detection Method: | |
| Confidence: | 1.85 |
| Match: | 1sknP |
| Description: | Skn-1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 3.16116926111366 | bayes_pls_golite062009 |
| transcription regulator activity | 2.56809196773333 | bayes_pls_golite062009 |
| DNA binding | 2.51449794308849 | bayes_pls_golite062009 |
| nucleic acid binding | 2.33205906020933 | bayes_pls_golite062009 |
| transcription factor activity | 2.10638151979258 | bayes_pls_golite062009 |
| protein binding | 1.64791933694023 | bayes_pls_golite062009 |
| protein heterodimerization activity | 0.735602594031742 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 0.483017958550706 | bayes_pls_golite062009 |
| protein dimerization activity | 0.26737339325017 | bayes_pls_golite062009 |
| transcription activator activity | 0.235928504008492 | bayes_pls_golite062009 |
|
Region A: Residues: [1188-1267] |
1 11 21 31 41 51
| | | | | |
1 LSENQLSLIR DIRRRGKNKV AAQNCRKRKL DQILTLEDEV NAVVKRKTQL NQDRDHLESE 60
61 RKRISNKFAM LHRHVFQYLR
|
| Detection Method: | |
| Confidence: | 7.69897 |
| Match: | 1hjbA |
| Description: | C/ebp beta |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1268-1383] |
1 11 21 31 41 51
| | | | | |
1 DPEGNPCSPA DYSLQQAADG SVYLLPREKS EGNNTATAAS NAVSSASGGS LNGHVPTQAP 60
61 MHSHQSHGMQ AQHVVGGMSQ QQQQQSRLPP HLQQQHHLQS QQQQPGGQQQ QQHRKE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
