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Protein Overview: HP1e-PA

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

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[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..174] PSI-BLAST 16.221849 Tandem chromodomains of human CHD1 complexed with Histone H3 Tail containing trimethyllysine 4 and phosphothreonine 3

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • transcription repressor activity
  • 4.08500855631983 bayes_pls_golite062009
  • transcription regulator activity
  • 3.64390820819794 bayes_pls_golite062009
  • methylated histone residue binding
  • 3.42338304360938 bayes_pls_golite062009
  • chromatin binding
  • 3.1924157640698 bayes_pls_golite062009
  • binding
  • 3.06758476214113 bayes_pls_golite062009
  • protein binding
  • 2.66728689880621 bayes_pls_golite062009
  • nucleic acid binding
  • 2.19167058827256 bayes_pls_golite062009
  • DNA binding
  • 2.05514577638135 bayes_pls_golite062009
  • histone binding
  • 2.00388175060339 bayes_pls_golite062009
  • transcription activator activity
  • 1.46529895769882 bayes_pls_golite062009
  • sequence-specific DNA binding
  • 1.10020047862576 bayes_pls_golite062009
  • DNA-dependent ATPase activity
  • 0.998957812785999 bayes_pls_golite062009
  • general transcriptional repressor activity
  • 0.75184432495983 bayes_pls_golite062009
  • DNA helicase activity
  • 0.726970683178132 bayes_pls_golite062009
  • ATP-dependent DNA helicase activity
  • 0.494788451379878 bayes_pls_golite062009
  • transcription corepressor activity
  • 0.294457188332415 bayes_pls_golite062009
  • catalytic activity
  • 0.14067200158938 bayes_pls_golite062009




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle