General Information: |
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Name(s) found: |
Dscam-PBD /
FBpp0110370
[FlyBase]
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Description(s) found:
SHOW ONLY BEST |
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Organism: | Drosophila melanogaster |
Length: | 2030 amino acids |
Gene Ontology: |
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Cellular Component: |
integral to plasma membrane
[ISS]
dendrite [IDA] neuronal cell body [IDA] axon [IDA] |
Biological Process: |
mushroom body development
[IMP]
dendrite self-avoidance [IDA][IMP] phagocytosis [IMP] axon guidance [IGI][IMP][TAS] peripheral nervous system development [IMP] neuron development [IMP] central nervous system morphogenesis [IMP] axonal fasciculation [IMP] axon extension involved in axon guidance [IMP] |
Molecular Function: |
protein binding
[IDA]
protein homodimerization activity [IPI] axon guidance receptor activity [IMP][NAS] bacterial cell surface binding [IDA] |
Sequence: |
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Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51 | | | | | | 1 MNMPNERLKW LMLFAAVALI ACGSQTLAAN PPDADQKGPV FLKEPTNRID FSNSTGAEIE 60 61 CKASGNPMPE IIWIRSDGTA VGDVPGLRQI SSDGKLVFPP FRAEDYRQEV HAQVYACLAR 120 121 NQFGSIISRD VHVRAVVNQF YEAEIMTEYV IRGNAAVLKC SIPSFVADFV RVESWIDDEG 180 181 NVLSFSDNYD GKYLVLPSGE LHIREVGPED GYKSYQCRTK HRLTGETRLS ATKGRLVITE 240 241 PVGRVSPKFP NTLTSSSFTG DEGSSQTLLC PAQAYPAPLF RWYKFIEGTT RKQAVVLNDR 300 301 VKQVSGTLII KDAVVEDSGK YLCVVNNSVG GESVETVLTV TAPLSAKIDP PTQTVDFGRP 360 361 AVFTCQYTGN PIKTVSWMKD GKAIGHSEPV LRIESVKKED KGMYQCFVRN DQESAEASAE 420 421 LKLGGRFDPP VIRQAFQEET MEPGPSVFLK CVAGGNPTPE ISWELDGKKI ANNDRYQVGQ 480 481 YVTVNGDVVS YLNITSVHAN DGGLYKCIAK SKVGVAEHSA KLNVYGLPYI RQMEKKAIVA 540 541 GETLIVTCPV AGYPIDSIVW ERDNRALPIN RKQKVFPNGT LIIENVERNS DQATYTCVAK 600 601 NQEGYSARGS LEVQVMVPPK LAPLPVNSPL YVGDYYQLTC AVVHGDAPFN ITWYYNNEPA 660 661 GDLAGVTILM HGRRSSSLNI ESVGGDHAGN YTCKGANRAG ETTAETHLSV KVPPRWILEP 720 721 TDKAFAQGSD AKVECKADGF PKPQVTWKKA VGDTPGEYKD LKKSDNIRVE EGTLHVDNIQ 780 781 KTNEGYYLCE AINGIGSGLS AVIMISVQAP PEFTEKLRNQ TARRGEPAVL QCEAKGEKPI 840 841 GILWNMNNMR LDPKNDNRYT IREEILSTGV MSSLSIKRTE RSDSALFTCV ATNAFGSDDA 900 901 SINMIVQEVP EMPYALKVLD KSGRSVQLSW AQPYDGNSPL DRYIIEFKRS RASWSEIDRV 960 961 IVPGHTTEAQ VQKLSPATTY NIRIVAENAI GTSQSSEAVT IITAEEAPSG KPQNIKVEPV1020 1021 NQTTMRVTWK PPPRTEWNGE ILGYYVGYKL SNTNSSYVFE TINFITEEGK EHNLELQNLR1080 1081 VYTQYSVVIQ AFNKIGAGPL SEEEKQFTAE GTPSQPPSDT ACTTLTSQTI RVGWVSPPLE1140 1141 SANGVIKTYK VVYAPSDEWY DETKRHYKKT ASSDTVLHGL KKYTNYTMQV LATTAGGDGV1200 1201 RSVPIHCQTE PDVPEAPTDV KALVMGNAAI LVSWRPPAQP NGIITQYTVY SKAEGAETET1260 1261 KTQKVPHYQM SFEATELEKN KPYEFWVTAS TTIGEGQQSK SIVAMPSDQV PAKIASFDDT1320 1321 FTATFKEDAK MPCLAVGAPQ PEITWKIKGV EFSANDRMRV LPDGSLLIKS VNRQDAGDYS1380 1381 CHAENSIAKD SITHKLIVLA PPQSPHVTLS ATTTDALTVK LKPHEGDTAP LHGYTLHYKP1440 1441 EFGEWETSEV SVDSQKHNIE GLLCGSRYQV YATGFNNIGA GEASDILNTR TKGQKPKLPE1500 1501 KPRFIEVSSN SVSLHFKAWK DGGCPMSHFV VESKKRDQIE WNQISNNVKP DNNYVVLDLE1560 1561 PATWYNLRIT AHNSAGFTVA EYDFATLTVT GGTIAPLDDG SGHGNVHTRI RLPAWMPEWL1620 1621 DLNFMVPLIA TVVVVAVGIC VVCVALSRRR ADDMRGGQKD VYYDVVYNQT MGPGATLDKR1680 1681 RPDLRDELGY IAPPNRKLPP VPGSNYNTCD RIKRGRGGLR SNHSTWDPRR NPNLYEELKA1740 1741 PPVPMHGNHY GHAHGNAECH YRHPGMEDEI CPYATFHLLG FREEMDPTKA MNFQTFPHQN1800 1801 GHAGPVPGHA GTMLPPGHPG HVHSRSGSQS MPRANRYQRK NSQGGQSSIY TPAPEYDDPA1860 1861 NCAEEDQYRR YTRVNSQGGS LYSGPGPEYD DPANCAPEED QYGSQYGGPY GQPYDHYGSR1920 1921 GSMGRRSIGS ARNPGNGSPE PPPPPPRNHD MSNSSFNDSK ESNEISEAEC DRDHGPRGNY1980 1981 GAVKRSPQPK DQRTTEEMRK LIERNETGPK QLQLQQANGA GFTAYDTMAV |
SHOWING SINGLE HITS. [ Hide Single Hits ]
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Domains predicted:
# | Region(s) | Method | Confidence | Match Description | |
1 | View Details | [1..138] | 82.69897 | No description for 2v5sA was found. | |
2 | View Details | [139..246] | 21.69897 | No description for 2ec8A was found. | |
3 | View Details | [247..908] | 56.221849 | Model of human carcinoembryonic antigen by homology modelling and curve-fitting to experimental solution scattering data | |
4 | View Details | [909..1368] | 28.522879 | No description for 2v5yA was found. | |
5 | View Details | [1369..1591] | 26.221849 | FRAGMENT OF HUMAN FIBRONECTIN ENCOMPASSING TYPE-III REPEATS 7 THROUGH 10 | |
6 | View Details | [1592..1800] | N/A | No confident structure predictions are available. | |
7 | View Details | [1801..2030] | 1.128993 | View MSA. No confident structure predictions are available. |
Source: Reynolds et al. 2008. Manuscript submitted |