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Protein Overview: SNX3

General Information:
Name(s) found: SNX3 / YOR357C [SGD]
Description(s) found:
Found 27 descriptions.
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  • Sorting nexin required to maintain late-Golgi resident enzymes in their proper location by recycling molecules from the prevacuolar compartment; contains a PX domain and sequence similarity to human Snx3p [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 162 amino acids

    Gene Ontology:
    Cellular Component: cytosol [IDALink to PubMed article]
    Biological Process: protein localization [IMPLink to PubMed article]
    Molecular Function: protein binding [IDALink to PubMed article]
    phosphatidylinositol-3-phosphate binding [IDALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPREFKSFGS TEKSLLSKGH GEPSYSEIYA EPENFLEIEV HNPKTHIPNG MDSKGMFTDY  60
   61 EIICRTNLPS FHKRVSKVRR RYSDFEFFRK CLIKEISMLN HPKVMVPHLP GKILLSNRFS 120
  121 NEVIEERRQG LNTWMQSVAG HPLLQSGSKV LVRFIEAEKF VG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

      BAIT PREY HITS PUBLICATION
    View Screen SNX3 RBD2 2 Unpublished Fields Lab Data
    View Screen SNX3 YMD8 2 Unpublished Fields Lab Data

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

      PROTEIN(S) PUBLICATION
    View Data SNX3 Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..162] PSI-BLAST 16.522879 p40phox NADPH oxidase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  2.88408675542289 bayes_pls_golite062009
  • protein binding
    		•  2.01416287650553 bayes_pls_golite062009
  • phosphoinositide binding
    		•  1.69611539954228 bayes_pls_golite062009
  • phospholipid binding
    		•  1.3509978234193 bayes_pls_golite062009
  • lipid binding
    		•  0.663652920263169 bayes_pls_golite062009
  • phosphatidylinositol-3-phosphate binding
    		•  0.643843925142106 bayes_pls_golite062009


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle