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Protein Overview: GDS1

General Information:
Name(s) found: GDS1 / YOR355W [SGD]
Description(s) found:
Found 26 descriptions.
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  • Protein of unknown function, required for growth on glycerol as a carbon source; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 522 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytoplasm [IDALink to PubMed article]
    mitochondrion [IDALink to PubMed articleLink to PubMed article]
    Biological Process: aerobic respiration [IGILink to PubMed article][IMPLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALANSRPLQ IPTLENEILH NSNSPVFQLN SMGFTTRADT ISNPGTDLIG NQPGMALDDN  60
   61 NLAGSSFSSS QEIKATKPKK DFGAPKKDNP LLEISKLIPV TGERPKPENR DSPLDDDVLH 120
  121 AVFLILWEMD PNQQGMTVKQ LCDLLLQKHP DMSNLSTKLS NLISAKLNAY VKKIEKGEKT 180
  181 LTYALSREWS NSSPRRMLYI YRGILSPDYK EHAQAVTMQL KQQLETSGDT SDFNSNGKKK 240
  241 RESSSNQLVN NDSYSSSMTD MKNMSSNSSF SKNLNVGNLA FSLSPEFNIP YSTSPVSLNL 300
  301 SPSMSNNQQQ LLTPNSASKS KNNNKKRNYM DEDTNESMTE PKKTKTTKPG KQTKSQSLSV 360
  361 LSTPKKGSSA SLSTFASSKN ISPDSSLSHN ASSNTYVTAA AAAPRLSKLL PKNGFKKNSR 420
  421 SSSELAAIHK VISTQTPIES SSESSQYNSS SSSPVNSAAA SSAESLSDIN SSQDNGRESN 480
  481 PSSQESRNEV TNWMKIVRNG FLTHDIESPE SITLDDLENI FN

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Krogan NJ, et al. (2006) GDS1 GEP5 IRC19 PET130 RPM2 RRG1 RRG8 YHR054C

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run ASF1 sample 3121 run on DecaLCQ: searched for phosphorylation Green EM, et al (2005)
    View Run RLF2 identification data - first search in cascade Green EM, et al (2005)
    View Run MLP2 #03 Alpha Factor Prep1-TiO2 Flowthrough Keck JM, et al. (2011)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

      PROTEIN(S) PUBLICATION
    View Data GDS1 Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..129] deduced N/A No confident structure predictions are available.
    2 View Details [130..522] MSA 10.052997 View MSA. No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle