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Protein Overview: IRC19

General Information:
Name(s) found: IRC19 / YLL033W [SGD]
Description(s) found:
Found 26 descriptions.
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  • Putative protein of unknown function; YLL033W is not an essential gene but mutant is defective in spore formation; null mutant displays increased levels of spontaneous Rad52p foci [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 230 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: ascospore formation [IMPLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKPSITITT AKAIITPDYT LIKSHSKYQL PSRFQKLDAD SPERSTVVKL FYRRFMRLKP  60
   61 FISNVKMVKD TYRDYVRYKF MKENYELKRY LVFNPDGLRS KINLELLSNT KCCERILPVT 120
  121 EMQRTLEFVL KSCSYLPETK VQKWDIARDN TYCRQILKNL LTMQYEKYRS ILHRGIGHDE 180
  181 LDVKFSHLKT TSSPLTKLNK TEKKKIPLFK VFSDFDTTLI YLNETLGTRL

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Krogan NJ, et al. (2006) GDS1 GEP5 IRC19 PET130 RPM2 RRG1 RRG8 YHR054C

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

      BAIT PREY HITS PUBLICATION
    View Screen RHO5 IRC19 2 Unpublished Fields Lab Data

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..230] deduced N/A No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle