YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: YNR021W

General Information:
Name(s) found: YNR021W [SGD]
Description(s) found:
Found 23 descriptions.
SHOW ALL
  • Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the endoplasmic reticulum; YNR021W is not an essential gene [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 404 amino acids

    Gene Ontology:
    Cellular Component: endoplasmic reticulum [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSSIFGPLT GFLERVNSLN APYQALSYDE QKAMTIWQRV KFYNWTFELC ALGVLFLVYA  60
   61 FYKFGNSVNL KRGNQIFQSL HSFLANDLKF SRVGFNINDS KIFTVEHQNT WFSSFATGRS 120
  121 AIKSINLNLH LVARSNPFSM CLEYLLGFFF ASLKSKQLEE FMEIVIRPNG ILVTSESAHP 180
  181 NKNAHEILTK FRFVTSIVNK EFMNQARTEN YFLSIAHTSE NDKLPNNFVY MSDVNQLSGF 240
  241 MFHYSKPYEV LSQAGNLLKY ISFTDLPVNP PRDDKEWESS IEPKAIIRCA VPQNENELKL 300
  301 LNQIISLVVE IYDGFTQDLV QQSPNLFITN DILKRTTNLR QQELNKIKKF MKETELELAK 360
  361 EKKLELEKAK RRQLKASGQQ EKVDQKMKEK RERRLKNKQR TRFQ

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Krogan NJ, et al. (2006) CTP1 ERV25 FKS1 FTR1 MRH1 OLE1 PEX27 ROG3 RPL10 RPL36B RPL37A RPP1A SEC11 SPC1 SPC2 SPC3 TCM62 TSC13 YNR021W

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run RPA135 No Comments Schneider, DA, et al. (2006)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

      PROTEIN(S) PUBLICATION
    View Data YNR021W Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..322] MSA 1.009923 View MSA. No confident structure predictions are available.
    2 View Details [323..404] MSA 6.014997 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.429945198807351 bayes_pls_golite062009


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle