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Protein Overview: PDR8

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run RPA135 No Comments Schneider, DA, et al. (2006)
View Run MLP2 #25 Asynchronous Prep3-TiO2 Flowthrough Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data PDR8 Huh WK, et al. (2003)

Protein Structure Data


[What does the above image mean?]
[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..101] PSI-BLAST 68.67837 Hap1 (Cyp1); HAP1
2 View Details [102..169] deduced N/A No confident structure predictions are available.
3 View Details [170..446] MSA 6.120992 View MSA. No confident structure predictions are available.
4 View Details [447..507] deduced N/A Confident ab initio structure predictions are available.
5 View Details [508..701] MSA 1.026958 View MSA. No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • transcription regulator activity
  • 4.56444258780502 bayes_pls_golite062009
  • DNA binding
  • 4.26146437716972 bayes_pls_golite062009
  • nucleic acid binding
  • 4.17369933547911 bayes_pls_golite062009
  • transcription factor activity
  • 3.049435548132 bayes_pls_golite062009
  • sequence-specific DNA binding
  • 2.98081393153291 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
  • 2.93914501897006 bayes_pls_golite062009
  • binding
  • 2.91929847152301 bayes_pls_golite062009
  • specific RNA polymerase II transcription factor activity
  • 2.44382866473054 bayes_pls_golite062009
  • transcription activator activity
  • 2.24483536326713 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.65

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle