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Protein Overview: CYC1

General Information:
Name(s) found: CYC1 / YJR048W [SGD]
Description(s) found:
Found 37 descriptions.
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  • Cytochrome c, isoform 1; electron carrier of the mitochondrial intermembrane space that transfers electrons from ubiquinone-cytochrome c oxidoreductase to cytochrome c oxidase during cellular respiration [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 109 amino acids

    Gene Ontology:
    Cellular Component: mitochondrial intermembrane space [IDALink to PubMed article]
    mitochondrion [IDALink to PubMed article]
    Biological Process: electron transport [TASLink to PubMed article]
    Molecular Function: electron carrier activity [TASLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTEFKAGSAK KGATLFKTRC LQCHTVEKGG PHKVGPNLHG IFGRHSGQAE GYSYTDANIK  60
   61 KNVLWDENNM SEYLTNPKKY IPGTKMAFGG LKKEKDRNDL ITYLKKACE

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Qiu et al. (2008) COB COX1 COX2 COX3 COX4 COX8 CYB2 CYC1 CYC7 CYT1 MCR1 QCR2 QCR9 RIP1

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data CYC1 Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..109] PSI-BLAST 589.980454 Mitochondrial cytochrome c

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor
    		•  7.77694826742571 bayes_pls_golite062009
  • ubiquinol-cytochrome-c reductase activity
    		•  7.77694826742571 bayes_pls_golite062009
  • electron transporter, transferring electrons within CoQH2-cytochrome c reductase complex activity
    		•  5.3228546115966 bayes_pls_golite062009
  • electron transporter, transferring electrons from CoQH2-cytochrome c reductase complex and cytochrome c oxidase complex activity
    		•  4.97969104367667 bayes_pls_golite062009
  • hydrogen ion transmembrane transporter activity
    		•  4.83198573144889 bayes_pls_golite062009
  • oxidoreductase activity
    		•  4.80453374142732 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  4.69221581420605 bayes_pls_golite062009
  • electron carrier activity
    		•  4.50051625202265 bayes_pls_golite062009
  • oxidoreductase activity, acting on diphenols and related substances as donors
    		•  4.39250939893637 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  4.11195915185456 bayes_pls_golite062009
  • phosphoprotein phosphatase activity
    		•  3.07137767450073 bayes_pls_golite062009
  • protein serine/threonine phosphatase activity
    		•  3.05900853572871 bayes_pls_golite062009
  • oxidoreductase activity, acting on peroxide as acceptor
    		•  2.75675744166378 bayes_pls_golite062009
  • peroxidase activity
    		•  2.75675744166378 bayes_pls_golite062009
  • antioxidant activity
    		•  2.60087791856484 bayes_pls_golite062009
  • phosphatase activity
    		•  2.58257339159796 bayes_pls_golite062009
  • phosphoric ester hydrolase activity
    		•  2.48742191899955 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  1.67966224915812 bayes_pls_golite062009
  • binding
    		•  1.60003804759784 bayes_pls_golite062009
  • transporter activity
    		•  1.44083733311658 bayes_pls_golite062009
  • protein binding
    		•  1.33090393131805 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  1.28161778948702 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  1.15573917988688 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  1.01443199299167 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  0.881486298760893 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  0.783993292151034 bayes_pls_golite062009
  • hydrolase activity
    		•  0.624991704964657 bayes_pls_golite062009


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle