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Protein Overview: YHR097C

General Information:
Name(s) found: YHR097C [SGD]
Description(s) found:
Found 22 descriptions.
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  • Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and the nucleus [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 366 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytoplasm [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNQTGRTIGG PQNGVNTVIN PFRVSPSEDR VSSRDETPRN YNNPFLNEDD TRRAHNSSVS  60
   61 NSRQERLPSY EEAAGTPKQQ APYPKEKKRS SGSNSHQHNH HHHRRTSHGH RDKDKQKSKS 120
  121 RTKVKPPKNV DTIDKMDVTG LFGGSFHHDG PFDACTPQRN KNNKVAPVLA FPADGPNNTV 180
  181 GGRTSKKSTL DEVFGRETVD DDSETLNQLQ DRAYLFNKAN SSTTTLDAIK PNSKNITQFD 240
  241 SKMKTELVHG PITMGLGSTT FLDGAPASSA AIEQDVINHA QESRRKNSIA RKKSLPSRRH 300
  301 LQVNNNNLKL VKTHSGHLEQ KDVDDNRTSV PVTATQGSGH EDVVKKENTG NKLLRRVKSL 360
  361 KTSKKH

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Krogan NJ, et al. (2006) CPR5 MDH3 PFS1 YDR248C YHL008C YHR097C

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run RPA135 No Comments Schneider, DA, et al. (2006)
    View Run MLP2 #29 Asynchronous Prep5-TiO2 Flowthrough Keck JM, et al. (2011)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

      PROTEIN(S) PUBLICATION
    View Data YHR097C Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..122] MSA 1.027996 View MSA. No confident structure predictions are available.
    2 View Details [123..298] Pfam 80.086186 No description for PF08316.2 was found. No confident structure predictions are available.
    3 View Details [299..366] deduced N/A No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle