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Protein Overview: TDA10

General Information:
Name(s) found: TDA10 / YGR205W [SGD]
Description(s) found:
Found 34 descriptions.
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  • ATP-binding protein of unknown function; crystal structure resembles that of E.coli pantothenate kinase and other small kinases [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 290 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytoplasm [IDALink to PubMed articleLink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: ATP binding [IDALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCDKSKTVLD YTIEFLDKYI PEWFETGNKC PLFIFFSGPQ GSGKSFTSIQ IYNHLMEKYG  60
   61 GEKSIGYASI DDFYLTHEDQ LKLNEQFKNN KLLQGRGLPG THDMKLLQEV LNTIFNNNEH 120
  121 PDQDTVVLPK YDKSQFKGEG DRCPTGQKIK LPVDIFILEG WFLGFNPILQ GIENNDLLTG 180
  181 DMVDVNAKLF FYSDLLWRNP EIKSLGIVFT TDNINNVYGW RLQQEHELIS KVGKGMTDEQ 240
  241 VHAFVDRYMP SYKLYLNDFV RSESLGSIAT LTLGIDSNRN VYSTKTRCIE

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Ho Y, et al. (2002) COP1 ECM29 PAA1 PTC3 REP1 TCB1 TDA10

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data TDA10 Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..290] PSI-BLAST 51.69897 Pantothenate kinase PanK

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.26687146372087 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  0.420384345567397 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  0.411077559082206 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  0.399864241228259 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  0.398496265411009 bayes_pls_golite062009
  • catalytic activity
    		•  0.234613562021476 bayes_pls_golite062009
  • hydrolase activity
    		•  0.216831145240405 bayes_pls_golite062009


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle