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Protein Overview: YBR141C

General Information:
Name(s) found: YBR141C [SGD]
Description(s) found:
Found 24 descriptions.
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  • Putative S-adenosylmethionine-dependent methyltransferase; green fluorescent protein (GFP)-fusion protein localizes to the nucleolus; YBR141C is not an essential gene [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 337 amino acids

    Gene Ontology:
    Cellular Component: nucleolus [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHSRKSKSIT GKRKQVGSNV TRVIKPQKTR RIIRRFHHLI NKRQSICKFL CLKENLDDSN  60
   61 EEKNDKIIRL SIKGNVRLGK YYEDGKSQSF NDAMESQLLR LHSLIKNESK SKDTSDLAVM 120
  121 YTLLGYIMNQ INKLGGLETY QIASQNGQLK ERGGDTSKLL EKWIRSSFEN CPGAVALEIG 180
  181 SLSSGNRISR CALFRNVVRI DLEEHEGVIK QDFMERPLPR NENDKFDLIS CSLVLNFVKN 240
  241 HRDRGAMCHR MVKFLKPQGY IFIVLPQACV THSRYCDKTL LQNLLGSIGL IMLNSHQSNK 300
  301 LYYCLYQLQV VSPQPSSFSK RIKVNDGPGL NNFGITL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run MLP2 #32 Asynchronous Prep-No Phosphopeptide enrichment Keck JM, et al. (2011)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

      PROTEIN(S) PUBLICATION
    View Data YBR141C Huh WK, et al. (2003)
    View Data YBR141C and NOP56 Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..86] deduced N/A No confident structure predictions are available.
    2 View Details [87..337] MSA 1.002911 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transcription factor activity
    		•  3.18366984273735 bayes_pls_golite062009
  • methyltransferase activity
    		•  3.10667683620555 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  3.03092170856472 bayes_pls_golite062009
  • S-adenosylmethionine-dependent methyltransferase activity
    		•  2.91374296950366 bayes_pls_golite062009
  • RNA methyltransferase activity
    		•  2.63941856307703 bayes_pls_golite062009
  • rRNA methyltransferase activity
    		•  2.14987271695676 bayes_pls_golite062009
  • transferase activity
    		•  1.97261773840408 bayes_pls_golite062009
  • sequence-specific DNA binding
    		•  1.67826024217505 bayes_pls_golite062009
  • transcription repressor activity
    		•  1.3964019208723 bayes_pls_golite062009
  • tRNA methyltransferase activity
    		•  1.38914410921124 bayes_pls_golite062009
  • catalytic activity
    		•  1.16970557486814 bayes_pls_golite062009
  • N-methyltransferase activity
    		•  1.13958114124635 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
    		•  1.01831614309793 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.953292160159369 bayes_pls_golite062009
  • DNA binding
    		•  0.878229880745235 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.861417215599224 bayes_pls_golite062009
  • rRNA (guanine) methyltransferase activity
    		•  0.596425215866866 bayes_pls_golite062009
  • protein methyltransferase activity
    		•  0.537387676293877 bayes_pls_golite062009
  • binding
    		•  0.486361285495359 bayes_pls_golite062009
  • rRNA (adenine) methyltransferase activity
    		•  0.374941249737739 bayes_pls_golite062009
  • rRNA (adenine-N6,N6-)-dimethyltransferase activity
    		•  0.300104233454652 bayes_pls_golite062009
  • rRNA (uridine) methyltransferase activity
    		•  0.129311242793576 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle