Protein Overview: YA7B_SCHPO

General Information:
Name(s) found:	YA7B_SCHPO [Swiss-Prot]
Description(s) found: Found 2 descriptions. SHOW ALL	Uncharacterized protein C24H6.11c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC24H6.11c PE=3 SV=1 [Swiss-Prot]
Organism:	Schizosaccharomyces pombe 972h-
Length:	958 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	NONE FOUND
Molecular Function:	NONE FOUND

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPTHSLNQKR SLLYPSIDNG SVPDSSFLSQ SFRDTNDIHL LSARLASVEV DPETLPSNSP  60
   61 ETNDDVSNYD YMSISSYQRA HSLASTSRND FNYRPSEINE TRPLLPEREE HSSQLPPAQN 120
  121 QVLPFQSLNA PSKKLRGRIS LSKIYQFFFD DKGPILFILN IPAVIIGLLL NILDALSYGL 180
  181 ILFPISDPLF KNLGADGLAI YYVSCVVSQL VYSLGGSFFK GSVGSEMIEV IPFFHQIAFT 240
  241 ILNRVGEDNP KSVIATTILA YCLSSILTGL VFFILGILRL GRLIEFFPRH ILLGCIGGVG 300
  301 SFLVLTAVEV SSRLEGSVSF NWASLSALFQ PMTFAKWSIP LFLSSALEFA QQRWPHPFLI 360
  361 PSFFVIAPAI FYVLVWAIPG MSLEYLRETG WVFSSTETNV PWYHFYSLFS LRDTDWSALL 420
  421 ATVPEMCALT FFGILHVPIN VPALAISLGL DFVDTDKELI AHGVSNTLSG AVGSIQNYMT 480
  481 YTNSLMFIRS GGNNRLAGIM LALATVALLV IGPGIIAYIP VWTVGCLIYL LGIELLKESL 540
  541 WDPIGITTKI EYFTICAIVF TMTVVDFVVG IVIGIIMACV FFVIQASSRS ALRGIYSGGI 600
  601 VRSTVRRPMN QQRFLNEIGR QIQVCKLSGF LFFGTINGVE KNIAGLIEEL NVSNNPLRFL 660
  661 IIDFSLVNGA DFSVVQAFLR IRRMLATMNV QLCVCGLDET RSSFKTLTTM CFGGDDNCGC 720
  721 QVFEDVNSSL EYCENMLLDD YDVYRTKLLH KAGYSHTLAV PGKHKQNISM AETFSPSPRH 780
  781 DLLRQVAMSS VKAETKELSK FEKYAKYEQP FPLLMQVFGE ITTKREDFWL GLCPFFKKAF 840
  841 LRKGDLLWRK GDTPSKLVIL ETGMVKASYQ MDRESLSENI TCLCVVGELP FFSKTCYNAT 900
  901 VVAELDSAVW ILDREGWETM LKSSDKAEVI ENEMLYLTLK MTRDKFNVFT NFALNLYR

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..141]	PSI-BLAST	26.69897	Erythrocite membrane Band 3
2	View Details	[142..519]	PSI-BLAST	65.0	Mitochondrial cytochrome b subunit, C-terminal domain; Mitochondrial cytochrome b subunit, N-terminal domain
3	View Details	[520..601]	deduced	N/A	No confident structure predictions are available.
4	View Details	[602..727]	PSI-BLAST	3.09691	Solution Structure of putative anti sigma factor antagonist from Thermotoga maritima (TM1442)
5	View Details	[728..958]	PSI-BLAST	44.0	HCN2J 443-645 in the presence of cGMP

Functions predicted (by domain):

#

Gene Ontology predictions

1

No functions predicted.

2

Term	Confidence	Notes
ubiquinol-cytochrome-c reductase activity	1.84397718479397	bayes_pls_golite062009
oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor	1.84397718479397	bayes_pls_golite062009
oxidoreductase activity, acting on diphenols and related substances as donors	1.46506661289025	bayes_pls_golite062009
oxidoreductase activity	1.04489900181563	bayes_pls_golite062009
hydrogen ion transmembrane transporter activity	1.01648249832407	bayes_pls_golite062009
monovalent inorganic cation transmembrane transporter activity	0.96543059681604	bayes_pls_golite062009
cation transmembrane transporter activity	0.93489728358628	bayes_pls_golite062009
ion transmembrane transporter activity	0.90519924080591	bayes_pls_golite062009
inorganic cation transmembrane transporter activity	0.828564353399269	bayes_pls_golite062009
electron carrier activity	0.795356798782267	bayes_pls_golite062009
substrate-specific transmembrane transporter activity	0.79008311732545	bayes_pls_golite062009
transmembrane transporter activity	0.76908331657866	bayes_pls_golite062009
transporter activity	0.75734453197391	bayes_pls_golite062009
substrate-specific transporter activity	0.74459953925375	bayes_pls_golite062009
catalytic activity	0.292921973619001	bayes_pls_golite062009
binding	0.014145172910173	bayes_pls_golite062009

3

No functions predicted.

4

Term	Confidence	Notes
binding	1.07653468396849	bayes_pls_golite062009
protein binding	0.597573611851393	bayes_pls_golite062009

5

Term	Confidence	Notes
channel activity	0.9948983230902	bayes_pls_golite062009
passive transmembrane transporter activity	0.9948983230902	bayes_pls_golite062009
ion channel activity	0.98755773817668	bayes_pls_golite062009
substrate-specific channel activity	0.987458104759969	bayes_pls_golite062009
gated channel activity	0.78371914338887	bayes_pls_golite062009
ion transmembrane transporter activity	0.7684791403927	bayes_pls_golite062009
cation channel activity	0.7233798223572	bayes_pls_golite062009
ligand-gated ion channel activity	0.70844158731597	bayes_pls_golite062009
ligand-gated channel activity	0.70844158731597	bayes_pls_golite062009
substrate-specific transmembrane transporter activity	0.6504618496083	bayes_pls_golite062009
transmembrane transporter activity	0.62176462883745	bayes_pls_golite062009
transporter activity	0.60710287780621	bayes_pls_golite062009
substrate-specific transporter activity	0.60224718938208	bayes_pls_golite062009
cation transmembrane transporter activity	0.49512775442004	bayes_pls_golite062009
binding	0.447920938568048	bayes_pls_golite062009
metal ion transmembrane transporter activity	0.35806938795889	bayes_pls_golite062009

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

[View Details]

Source: Reynolds et al. 2008. Manuscript submitted

Philius confidence legend

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