YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: YA7B_SCHPO
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.45
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPTHSLNQKR SLLYPSIDNG SVPDSSFLSQ SFRDTNDIHL LSARLASVEV DPETLPSNSP  60
   61 ETNDDVSNYD YMSISSYQRA HSLASTSRND FNYRPSEINE TRPLLPEREE HSSQLPPAQN 120
  121 QVLPFQSLNA PSKKLRGRIS LSKIYQFFFD DKGPILFILN IPAVIIGLLL NILDALSYGL 180
  181 ILFPISDPLF KNLGADGLAI YYVSCVVSQL VYSLGGSFFK GSVGSEMIEV IPFFHQIAFT 240
  241 ILNRVGEDNP KSVIATTILA YCLSSILTGL VFFILGILRL GRLIEFFPRH ILLGCIGGVG 300
  301 SFLVLTAVEV SSRLEGSVSF NWASLSALFQ PMTFAKWSIP LFLSSALEFA QQRWPHPFLI 360
  361 PSFFVIAPAI FYVLVWAIPG MSLEYLRETG WVFSSTETNV PWYHFYSLFS LRDTDWSALL 420
  421 ATVPEMCALT FFGILHVPIN VPALAISLGL DFVDTDKELI AHGVSNTLSG AVGSIQNYMT 480
  481 YTNSLMFIRS GGNNRLAGIM LALATVALLV IGPGIIAYIP VWTVGCLIYL LGIELLKESL 540
  541 WDPIGITTKI EYFTICAIVF TMTVVDFVVG IVIGIIMACV FFVIQASSRS ALRGIYSGGI 600
  601 VRSTVRRPMN QQRFLNEIGR QIQVCKLSGF LFFGTINGVE KNIAGLIEEL NVSNNPLRFL 660
  661 IIDFSLVNGA DFSVVQAFLR IRRMLATMNV QLCVCGLDET RSSFKTLTTM CFGGDDNCGC 720
  721 QVFEDVNSSL EYCENMLLDD YDVYRTKLLH KAGYSHTLAV PGKHKQNISM AETFSPSPRH 780
  781 DLLRQVAMSS VKAETKELSK FEKYAKYEQP FPLLMQVFGE ITTKREDFWL GLCPFFKKAF 840
  841 LRKGDLLWRK GDTPSKLVIL ETGMVKASYQ MDRESLSENI TCLCVVGELP FFSKTCYNAT 900
  901 VVAELDSAVW ILDREGWETM LKSSDKAEVI ENEMLYLTLK MTRDKFNVFT NFALNLYR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle