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Protein Overview: GYRB_ECOLI

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

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[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..394] PSI-BLAST 166.0 DNA gyrase B
2 View Details [395..730] PSI-BLAST 66.30103 TOPOISOMERASE RESIDUES 410-1202,
3 View Details [731..804] FFAS03 1.62 TOPOISOMERASE RESIDUES 410-1202,

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • DNA topoisomerase activity
  • 12.6906165486321 bayes_pls_golite062009
  • DNA topoisomerase (ATP-hydrolyzing) activity
  • 11.8861942287485 bayes_pls_golite062009
  • isomerase activity
  • 8.13079712911425 bayes_pls_golite062009
  • transcription regulator activity
  • 2.14522015372277 bayes_pls_golite062009
  • catalytic activity
  • 2.10890475146569 bayes_pls_golite062009
  • protein kinase activity
  • 1.84867054522487 bayes_pls_golite062009
  • kinase activity
  • 1.68443268281997 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
  • 1.64025200399404 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
  • 1.60156177836014 bayes_pls_golite062009
  • DNA binding
  • 1.5298919664856 bayes_pls_golite062009
  • structural constituent of ribosome
  • 1.38725999901881 bayes_pls_golite062009
  • binding
  • 1.38505389441989 bayes_pls_golite062009
  • nucleic acid binding
  • 1.36270841743065 bayes_pls_golite062009
  • transferase activity
  • 1.09369139087478 bayes_pls_golite062009
  • structural molecule activity
  • 1.04534150109805 bayes_pls_golite062009
  • signal transducer activity
  • 0.996368427522977 bayes_pls_golite062009
  • molecular transducer activity
  • 0.996368427522977 bayes_pls_golite062009
  • exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters
  • 0.86218415868631 bayes_pls_golite062009
  • exonuclease activity
  • 0.76163144715311 bayes_pls_golite062009
  • nuclease activity
  • 0.42266682237543 bayes_pls_golite062009
  • ribonuclease activity
  • 0.0675296198098132 bayes_pls_golite062009
  • mismatched DNA binding
  • 0.0671550940422005 bayes_pls_golite062009
    2
    Term Confidence Notes
  • DNA topoisomerase activity
  • 16.1862836613251 bayes_pls_golite062009
  • DNA topoisomerase (ATP-hydrolyzing) activity
  • 15.3845248199845 bayes_pls_golite062009
  • isomerase activity
  • 11.5598219279347 bayes_pls_golite062009
  • DNA binding
  • 4.42972615310468 bayes_pls_golite062009
  • nucleic acid binding
  • 4.21774496265744 bayes_pls_golite062009
  • binding
  • 3.95084202265591 bayes_pls_golite062009
  • catalytic activity
  • 1.83123392049501 bayes_pls_golite062009
  • DNA-dependent ATPase activity
  • 1.17291817800492 bayes_pls_golite062009
  • protein binding
  • 0.0229806746449869 bayes_pls_golite062009
    3
    Term Confidence Notes
  • DNA topoisomerase activity
  • 15.4936903203186 bayes_pls_golite062009
  • DNA topoisomerase (ATP-hydrolyzing) activity
  • 14.6489242328866 bayes_pls_golite062009
  • isomerase activity
  • 11.0996144353545 bayes_pls_golite062009
  • DNA binding
  • 4.07071788473104 bayes_pls_golite062009
  • nucleic acid binding
  • 3.8906242200463 bayes_pls_golite062009
  • binding
  • 3.74481651990022 bayes_pls_golite062009
  • catalytic activity
  • 1.68981384280236 bayes_pls_golite062009
  • DNA-dependent ATPase activity
  • 0.95809415738291 bayes_pls_golite062009
  • protein binding
  • 0.0435629034939063 bayes_pls_golite062009




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle