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Protein Overview: EDL16_ARATH

General Information:
Name(s) found: EDL16_ARATH [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
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  • Sugar transporter ERD6-like 16 OS=Arabidopsis thaliana GN=At5g18840 PE=2 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 482 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEA][ISS]
    integral to membrane [IEA]
    Biological Process: transmembrane transport [IEA]
    transport [IEA]
    Molecular Function: carbohydrate transmembrane transporter activity [ISS]
    sugar:hydrogen symporter activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIREIKDVE RGEIVNKVED LGKPFLTHED DEKESENNES YLMVLFSTFV AVCGSFEFGS  60
   61 CVGYSAPTQS SIRQDLNLSL AEFSMFGSIL TIGAMLGAVM SGKISDFSGR KGAMRTSACF 120
  121 CITGWLAVFF TKGALLLDVG RFFTGYGIGV FSYVVPVYIA EISPKNLRGG LTTLNQLMIV 180
  181 IGSSVSFLIG SLISWKTLAL TGLAPCIVLL FGLCFIPESP RWLAKAGHEK EFRVALQKLR 240
  241 GKDADITNEA DGIQVSIQAL EILPKARIQD LVSKKYGRSV IIGVSLMVFQ QFVGINGIGF 300
  301 YASETFVKAG FTSGKLGTIA IACVQVPITV LGTILIDKSG RRPLIMISAG GIFLGCILTG 360
  361 TSFLLKGQSL LLEWVPSLAV GGVLIYVAAF SIGMGPVPWV IMSEIFPINV KGIAGSLVVL 420
  421 VNWSGAWAVS YTFNFLMSWS SPGTFYLYSA FAAATIIFVA KMVPETKGKT LEEIQACIRR 480
  481 ET

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..482] PSI-BLAST 24.69897 Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transporter activity
    		•  4.09176719149278 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.59744164024479 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  3.5865018981083 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  3.54194478414824 bayes_pls_golite062009
  • hexose phosphate transmembrane transporter activity
    		•  3.3746965264994 bayes_pls_golite062009
  • glucose-6-phosphate transmembrane transporter activity
    		•  3.3746965264994 bayes_pls_golite062009
  • sugar:hydrogen symporter activity
    		•  2.99050613058546 bayes_pls_golite062009
  • cation:sugar symporter activity
    		•  2.99050613058546 bayes_pls_golite062009
  • monosaccharide transmembrane transporter activity
    		•  2.63293544825311 bayes_pls_golite062009
  • carbohydrate transmembrane transporter activity
    		•  2.62141276633776 bayes_pls_golite062009
  • sugar transmembrane transporter activity
    		•  2.47557586092261 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  2.21266150105753 bayes_pls_golite062009
  • solute:hydrogen symporter activity
    		•  2.10485633822652 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  1.79369588808394 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  1.59419818573076 bayes_pls_golite062009
  • binding
    		•  1.46605775041083 bayes_pls_golite062009
  • secondary active transmembrane transporter activity
    		•  1.22264637452409 bayes_pls_golite062009
  • polyol transmembrane transporter activity
    		•  0.924836669821548 bayes_pls_golite062009
  • alcohol transmembrane transporter activity
    		•  0.924836669821548 bayes_pls_golite062009
  • glycerol transmembrane transporter activity
    		•  0.812001619402678 bayes_pls_golite062009
  • symporter activity
    		•  0.74591237387473 bayes_pls_golite062009
  • solute:cation symporter activity
    		•  0.74591237387473 bayes_pls_golite062009
  • sugar binding
    		•  0.285073104957756 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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