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Protein Overview: gi|15810395, gi|...

General Information:
Name(s) found: gi|20258921 [NCBI NR]
gi|18391166 [NCBI NR]
gi|15810395 [NCBI NR]
Description(s) found:
Found 11 descriptions.
SHOW ALL
  • gi|20258921|gb|AAM14154.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18391166|ref|NP_563871.1| emb2004 (embryo defective 2004) [Arabidopsis thaliana] [NCBI NR]
  • gi|15810395|gb|AAL07085.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 605 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    mitochondrion [IDA]
    chloroplast envelope [IDA]
    plastid [IDA]
    Biological Process: embryonic development ending in seed dormancy [NAS]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSSTSSLN LHSLPKASSG LGQWKSGFRY ELLGSSVSRN RLFVSPVVIH HRSPRLPAIK  60
   61 AAYNSDGGSK RSRVYKESQA ASGFPNAKVQ QIASSVLPLG SFAVVTFVLW KVVGKFMSPK 120
  121 SPKTSAGENN SSTQGVKWSI GAGTNLLQGF AAKVDREAKQ RLNEFAKELR SFRSVDMSGC 180
  181 NFGDEGLFFL AESLGYNQTV EEVSFSANGI TAAGVKAFDG VLQSNIMLKI LNLSGNPIGD 240
  241 EGAKTLCATL MENSSIEILQ LNSTDIGDEG AKEIAELLKR NSTLRIIELN NNMIDYSGFT 300
  301 SLAGALLENN TIRNLHLNGN YGGALGANAL AKGLEGNKSL RELHLHGNSI GDEGTRALMA 360
  361 GLSSHKGKVA LLDLGNNSIS AKGAFYVAEY IKRSKSLVWL NLYMNDIGDE GAEKIADSLK 420
  421 QNRSIATIDL GGNNIHAEGV NAIAQALKDN AIITTLEVGY NPIGPDGAKA LSEILKFHGN 480
  481 VKTLKLGWCQ IAAKGAEHVA DMLRYNNTIS VLDLRANGLR DEGASCLARS LKVVNEALTS 540
  541 VDLGFNEIRD DGAFAIAQAL KANEDVTVTS INLGNNFITK FGQSALTDAR DHVLEMTEKE 600
  601 VEIFF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..127] PSI-BLAST 19.522879 No description for 2id5A was found.
    2 View Details [128..605] PSI-BLAST 49.522879 Ribonuclease inhibitor

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • ribonuclease inhibitor activity
    		•  3.87919140298284 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  1.67797602305473 bayes_pls_golite062009
  • binding
    		•  1.56574509124278 bayes_pls_golite062009
  • protein binding
    		•  1.25553286004024 bayes_pls_golite062009
  • ubiquitin-protein ligase activity
    		•  0.32672094232364 bayes_pls_golite062009
  • small conjugating protein ligase activity
    		•  0.251667930277951 bayes_pls_golite062009
  • actin binding
    		•  0.23412414984029 bayes_pls_golite062009
  • catalytic activity
    		•  0.143741655309638 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.50

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle