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Protein Overview: gi|221313717

General Information:
Name(s) found: gi|221313717 [NCBI NR]
Description(s) found:
  • gi|221313717|ref|ZP_03595522.1| UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase [Bacillus subtilis subsp. subtilis str. NCIB 3610] [NCBI NR]
    • Organism: Bacillus subtilis subsp. subtilis str. NCIB 3610
    Length: 494 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLTKLLTYL TTEPSVNDSQ DPEITSIEMD SREVKKGSLF VCVKGYTVDG HDFAQKAVEN  60
   61 GAAAIVAERE VDVNVPVIIV RQSLRALSVL SDAFYGQPTK KLQLIGITGT NGKTSTTHMV 120
  121 DEILKKAGKR TGLIGTMYMK IGDETLPVKN TTPESVTLQK TFKKMNDKHV DTAIMEVSSH 180
  181 ALSLGRVHGC DYDIAVFTNL TQDHLDYHKT MDEYRHAKSL LFSQLGGAFN HEHPKRAVLN 240
  241 ADDEASAYFE KVTAAHISTY GIKNDADVMA KNISITAQGT SFDLVTNKGT KHITMSLVGQ 300
  301 FNVYNVLAAV ATCIAAGIPF EIITEAVEEL HGVRGRFELV NQQQEFPVIV DYAHTPDSLE 360
  361 NVLETCRDMT EGKLFVVVGC GGDRDKTKRP KMAKIAVELA DEPIFTSDNP RSEDPRAILR 420
  421 DMEAGVENAY YHSIANREQA IFFAIANAKK GDVVLIAGKG HETYQQIGNE TFDFDDAEVA 480
  481 ARAIVELNKN KTNS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..494] PSI-BLAST 92.221849 UDP-N-acetylmuramyl tripeptide synthetase MurE

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • acid-amino acid ligase activity
    		•  4.88688641690044 bayes_pls_golite062009
  • catalytic activity
    		•  2.66037860982128 bayes_pls_golite062009
  • ligase activity
    		•  2.11664086382078 bayes_pls_golite062009
  • ligase activity, forming carbon-nitrogen bonds
    		•  1.96801058335544 bayes_pls_golite062009
  • binding
    		•  0.0855924971489919 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.87

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle