| Protein: | gi|77627992, gi|... |
| Organism: | Rattus norvegicus |
| Length: | 161 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|77627992, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
191.0 | [0..9] | [158..512] |
|
|
176.0 | [0..5] | [158..359] |
|
|
167.0 | [0..7] | [158..121] |
|
|
167.0 | [0..9] | [158..77] |
|
Region A: Residues: [1-161] |
1 11 21 31 41 51
| | | | | |
1 MDDIYKAAVE QLTEEQKNEF KAAFDIFVLG AEDGCISTKE LGKVMRMLGQ NPTPEELQEM 60
61 IDEVDEDGSG TVDFDEFLVM MVRCMKDDSK GKSEEELSDL FRMFDKNADG YIDLDELKMM 120
121 LQATGETITE DDIEELMKDG DKNNDGRIDY DEFLEFMKGV E
|
| Detection Method: |  |
| Confidence: | 26.0 |
| Match: | 1la0A |
| Description: | Troponin C |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| troponin T binding | 7.68526659589559 | bayes_pls_golite062009 |
| structural constituent of muscle | 6.34041234021534 | bayes_pls_golite062009 |
| actin-dependent ATPase activity | 6.31366142616096 | bayes_pls_golite062009 |
| N-terminal myristoylation domain binding | 5.746886320739 | bayes_pls_golite062009 |
| microfilament motor activity | 5.62061944255026 | bayes_pls_golite062009 |
| G-protein beta/gamma-subunit binding | 5.51712867097471 | bayes_pls_golite062009 |
| myosin II heavy chain binding | 5.49688740358168 | bayes_pls_golite062009 |
| actin binding | 3.96919556235483 | bayes_pls_golite062009 |
| calcium ion binding | 3.79609619542776 | bayes_pls_golite062009 |
| myosin heavy chain binding | 3.63014173976595 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 3.49668552859347 | bayes_pls_golite062009 |
| motor activity | 3.25814691068414 | bayes_pls_golite062009 |
| binding | 3.17556402087346 | bayes_pls_golite062009 |
| cation binding | 2.62077305565026 | bayes_pls_golite062009 |
| metal ion binding | 2.62077305565026 | bayes_pls_golite062009 |
| ion binding | 2.61312132078717 | bayes_pls_golite062009 |
| tubulin binding | 2.51210014078446 | bayes_pls_golite062009 |
| actin filament binding | 2.35534489389161 | bayes_pls_golite062009 |
| myosin binding | 2.34125070430971 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 2.29802198409541 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 2.28098452079347 | bayes_pls_golite062009 |
| calcium sensitive guanylate cyclase activator activity | 2.25146252368284 | bayes_pls_golite062009 |
| microtubule binding | 2.17136406283012 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 2.12961051741613 | bayes_pls_golite062009 |
| metal ion transmembrane transporter activity | 1.74951443813569 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 1.51057181410195 | bayes_pls_golite062009 |
| kinase activity | 1.48008348280256 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 1.34982153616582 | bayes_pls_golite062009 |
| transcription regulator activity | 1.29595371278065 | bayes_pls_golite062009 |
| protein binding | 1.16246005294206 | bayes_pls_golite062009 |
| transporter activity | 1.15928534291452 | bayes_pls_golite062009 |
| molecular transducer activity | 1.11607939838219 | bayes_pls_golite062009 |
| signal transducer activity | 1.11607939838219 | bayes_pls_golite062009 |
| nucleic acid binding | 1.02715871704923 | bayes_pls_golite062009 |
| transferase activity | 1.00143834284844 | bayes_pls_golite062009 |
| actin monomer binding | 0.9954841049256 | bayes_pls_golite062009 |
| DNA binding | 0.98588735736701 | bayes_pls_golite062009 |
| nitric-oxide synthase binding | 0.965098383344279 | bayes_pls_golite062009 |
| transmembrane transporter activity | 0.945691505472547 | bayes_pls_golite062009 |
| cation channel activity | 0.856991182112951 | bayes_pls_golite062009 |
| guanylate cyclase regulator activity | 0.84389905735679 | bayes_pls_golite062009 |
| cyclase regulator activity | 0.84389905735679 | bayes_pls_golite062009 |
| structural molecule activity | 0.800850121197479 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.438908712437433 | bayes_pls_golite062009 |
| hydrolase activity | 0.378268353045111 | bayes_pls_golite062009 |
| substrate-specific channel activity | 0.366129174039334 | bayes_pls_golite062009 |
| 0.34446792626966 | bayes_pls_golite062009 | |
| voltage-gated cation channel activity | 0.341357838238159 | bayes_pls_golite062009 |
| channel regulator activity | 0.32809521759917 | bayes_pls_golite062009 |
| myosin II binding | 0.311147527050891 | bayes_pls_golite062009 |
| voltage-gated channel activity | 0.308919475701377 | bayes_pls_golite062009 |
| voltage-gated ion channel activity | 0.304496519713588 | bayes_pls_golite062009 |
| potassium channel activity | 0.260530997378698 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 0.246383459363256 | bayes_pls_golite062009 |
| ER retention sequence binding | 0.234166588492671 | bayes_pls_golite062009 |
| gated channel activity | 0.175191914660841 | bayes_pls_golite062009 |
| voltage-gated potassium channel activity | 0.157059988605635 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 0.116648335890738 | bayes_pls_golite062009 |
| channel activity | 0.0711800677928949 | bayes_pls_golite062009 |
| passive transmembrane transporter activity | 0.0711800677928949 | bayes_pls_golite062009 |
| receptor binding | 0.0645779132227158 | bayes_pls_golite062009 |
| ion channel activity | 0.0166394982861724 | bayes_pls_golite062009 |
