| Protein: | Mmp2-PB |
| Organism: | Drosophila melanogaster |
| Length: | 758 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Mmp2-PB.
| Description | E-value | Query Range |
Subject Range |
|
|
548.0 | [0..1] | [758..1] |
|
Region A: Residues: [1-558] |
1 11 21 31 41 51
| | | | | |
1 MFSKYVLATL LALFAQSMCI QELSLPPEGS HSTAATRSKK AKTAISEDIM YNYLMQFDYL 60
61 PKSDLETGAL RTEDQLKEAI RSLQSFGNIT VTGEIDSATA RLIQKPRCGV GDRRSADSFS 120
121 PDNLYHEIGS NVRVRRFALQ GPKWSRTDLT WSMVNRSMPD ASKVERMVQT ALDVWANHSK 180
181 LTFREVYSDQ ADIQILFARR AHGDGYKFDG PGQVLAHAFY PGEGRGGDAH FDADETWNFD 240
241 GESDDSHGTN FLNVALHELG HSLGLAHSAI PDAVMFPWYQ NNEVAGNLPD DDRYGIQQLY 300
301 GTKEKTWGPY KPQTTTTTTT TTTMRAMIYR ADKPAYWPWN NPSNNPNNDR NRARERQEEE 360
361 RRRQEKERRR QEEERRHQEE ERRRQVEERQ RQEEERWRQE QERQEEENRR RKIEHKSQWE 420
421 RNPSKERNRP RERQEMERRR QEQERQEQER QEQEDRRRER ERDRQLEWER RNRNGAREPV 480
481 TPTANTTPRP TNKPYPTVHR QHHHHNKPRK PKPDSCMTYY DAISIIRGEL FIFRGPYLWR 540
541 IGTSGLYNGY PTEIRRHW
|
| Detection Method: |  |
| Confidence: | 83.0 |
| Match: | 1su3A |
| Description: | X-ray structure of human proMMP-1: New insights into collagenase action |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| peptidase activity | 5.33358263548929 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 4.99457783001146 | bayes_pls_golite062009 |
| endopeptidase activity | 4.16532996235931 | bayes_pls_golite062009 |
| metallopeptidase activity | 3.94798058866011 | bayes_pls_golite062009 |
| metalloendopeptidase activity | 3.43236442601127 | bayes_pls_golite062009 |
| hydrolase activity | 2.63109625301237 | bayes_pls_golite062009 |
| receptor binding | 2.39767049122449 | bayes_pls_golite062009 |
| exopeptidase activity | 2.07461908743946 | bayes_pls_golite062009 |
| fibronectin binding | 1.96176072874085 | bayes_pls_golite062009 |
| binding | 1.08558665967526 | bayes_pls_golite062009 |
| catalytic activity | 0.891187593353827 | bayes_pls_golite062009 |
| growth factor activity | 0.720944017870466 | bayes_pls_golite062009 |
| integrin binding | 0.57684135424992 | bayes_pls_golite062009 |
| zinc ion binding | 0.49304764842799 | bayes_pls_golite062009 |
| aminopeptidase activity | 0.489265029264191 | bayes_pls_golite062009 |
| serine hydrolase activity | 0.393080846858665 | bayes_pls_golite062009 |
| serine-type peptidase activity | 0.374597710524442 | bayes_pls_golite062009 |
| protein binding | 0.2751534129453 | bayes_pls_golite062009 |
| peptidyl-dipeptidase activity | 0.27229268642689 | bayes_pls_golite062009 |
| serine-type endopeptidase activity | 0.252655558968584 | bayes_pls_golite062009 |
| cytokine receptor binding | 0.0255053415182105 | bayes_pls_golite062009 |
| ion binding | 0.0127744064783182 | bayes_pls_golite062009 |
|
Region A: Residues: [559-758] |
1 11 21 31 41 51
| | | | | |
1 SALPENLTKV DAVYENKQRQ IVFFIGREYY VFNSVMLAPG FPKPLASLGL PPTLTHIDAS 60
61 FVWGHNNRTY MTSGTLYWRI DDYTGQVELD YPRDMSIWSG VGYNIDAAFQ YLDGKTYFFK 120
121 NLGYWEFNDD RMKVAHARAK LSARRWMQCA RSANEVDDEQ RWTASLVSEG EETGRSGSRE 180
181 LRINHFILSI LLLAIANWRS
|
| Detection Method: | |
| Confidence: | 55.39794 |
| Match: | 1genA |
| Description: | C-TERMINAL DOMAIN OF GELATINASE A |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| peptidase activity | 4.77605895108929 | bayes_pls_golite062009 |
| endopeptidase activity | 4.18827723759395 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 4.11406001246159 | bayes_pls_golite062009 |
| metalloendopeptidase activity | 3.51480370240256 | bayes_pls_golite062009 |
| metallopeptidase activity | 3.43398140790377 | bayes_pls_golite062009 |
| hydrolase activity | 2.23273410408749 | bayes_pls_golite062009 |
| fibronectin binding | 1.96176072874085 | bayes_pls_golite062009 |
| binding | 1.84362171046259 | bayes_pls_golite062009 |
| receptor binding | 1.44902010383702 | bayes_pls_golite062009 |
| catalytic activity | 0.955691339512306 | bayes_pls_golite062009 |
| zinc ion binding | 0.63810111577935 | bayes_pls_golite062009 |
| protein binding | 0.555986151503952 | bayes_pls_golite062009 |
| ion binding | 0.546436712108448 | bayes_pls_golite062009 |
| transition metal ion binding | 0.382258173896381 | bayes_pls_golite062009 |
