Protein: | gi|151946338 |
Organism: | Saccharomyces cerevisiae YJM789 |
Length: | 423 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|151946338.
Description | E-value | Query Range |
Subject Range |
|
0.0 | [1..423] | [1..423] |
|
2.0E-90 | [1..421] | [1..368] |
|
3.0E-90 | [1..421] | [1..368] |
|
5.0E-82 | [3..413] | [4..412] |
|
3.0E-79 | [1..421] | [1..337] |
|
7.0E-78 | [3..422] | [4..421] |
|
3.0E-77 | [2..421] | [8..399] |
|
6.0E-76 | [8..421] | [16..404] |
|
2.0E-64 | [5..421] | [3..408] |
Region A: Residues: [1-121] |
1 11 21 31 41 51 | | | | | | 1 MAEIPDETIQ QFMALTNVSH NIAVQYLSEF GDLNEALNSY YASQTDDQKD RREEAHWNRQ 60 61 QEKALKQEAF STNSSNKAIN TEHVGGLCPK PGSSQGSNEY LKRKGSTSPE PTKGSSRSGS 120 121 G |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.205 | f.1.4 | Bcl-2 inhibitors of programmed cell death |
View | Download | 0.205 | f.1.4 | Bcl-2 inhibitors of programmed cell death |
Region A: Residues: [122-340] |
1 11 21 31 41 51 | | | | | | 1 NNSRFMSFSD MVRGQADDDD EDQPRNTFAG GETSGLEVTD PSDPNSLLKD LLEKARRGGQ 60 61 MGAENGFRDD EDHEMGANRF TGRGFRLGST IDAADEVVED NTSQSQRRPE KVTREITFWK 120 121 EGFQVADGPL YRYDDPANSF YLSELNQGRA PLKLLDVQFG QEVEVNVYKK LDESYKAPTR 180 181 KLGGFSGQGQ RLGSPIPGES SPAEVPKNET PAAQEQPMP |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Term | Confidence | Notes |
ubiquitin binding | 3.08647023955532 | bayes_pls_golite062009 |
small conjugating protein binding | 2.81420954636829 | bayes_pls_golite062009 |
binding | 2.2560795328149 | bayes_pls_golite062009 |
protein binding | 1.0980671422772 | bayes_pls_golite062009 |
nucleic acid binding | 0.603841502857006 | bayes_pls_golite062009 |
hydrolase activity | 0.356947688028291 | bayes_pls_golite062009 |
catalytic activity | 0.25774924710417 | bayes_pls_golite062009 |
DNA binding | 0.227398235412559 | bayes_pls_golite062009 |
transcription regulator activity | 0.194425568150525 | bayes_pls_golite062009 |
peptidase activity | 0.0141774634963068 | bayes_pls_golite062009 |
Region A: Residues: [341-423] |
1 11 21 31 41 51 | | | | | | 1 DNEPKQGDTS IQIRYANGKR EVLHCNSTDT VKFLYEHVTS NANTDPSRNF TLNYAFPIKP 60 61 ISNDETTLKD ADLLNSVVVQ RWA |
Detection Method: | |
Confidence: | 77.071898 |
Match: | 1jruA_ |
Description: | p47 |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [313-423] |
1 11 21 31 41 51 | | | | | | 1 LGSPIPGESS PAEVPKNETP AAQEQPMPDN EPKQGDTSIQ IRYANGKREV LHCNSTDTVK 60 61 FLYEHVTSNA NTDPSRNFTL NYAFPIKPIS NDETTLKDAD LLNSVVVQRW A |
Detection Method: | |
Confidence: | 34.221849 |
Match: | 1s3sG |
Description: | Crystal structure of AAA ATPase p97/VCP ND1 in complex with p47 C |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
binding | 2.63877637096497 | bayes_pls_golite062009 |
protein binding | 1.89134588490127 | bayes_pls_golite062009 |
small conjugating protein ligase activity | 1.83465130904364 | bayes_pls_golite062009 |
ubiquitin-protein ligase activity | 1.16468510691469 | bayes_pls_golite062009 |
acid-amino acid ligase activity | 0.919595189902044 | bayes_pls_golite062009 |
nucleic acid binding | 0.383121378043805 | bayes_pls_golite062009 |
hydrolase activity | 0.247201449341942 | bayes_pls_golite062009 |
DNA binding | 0.0840213088061073 | bayes_pls_golite062009 |
transcription regulator activity | 0.0485636215870291 | bayes_pls_golite062009 |
cytoskeletal protein binding | 0.00343080662821671 | bayes_pls_golite062009 |