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View Structure Prediction Details

Protein: gi|15233170, gi|...
Organism: Arabidopsis thaliana
Length: 418 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15233170, gi|....

Description E-value Query
Range
Subject
Range
gi|73951805 - gi|73951805|ref|XP_853384.1| PREDICTED: similar to macrophage erythroblast attacher (predicted) [Can...
309.0 [0..50] [417..116]

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Predicted Domain #1
Region A:
Residues: [1-418]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEIDSATNGN SDTVMTESAA TITPSPVVVS SSRSNQFTES LKLEHQLLRV PFEHYKKTIR  60
   61 TNHRSFEKEV STIVNGVGEL ADSDWSKDDT VSRLTCLVTR LQGLKRKLEE GSNVENLQAQ 120
  121 RCRARIDHLD SVDVENITEW NNTKLKRILV DYMLRMSYFE TATKLSESSN IMDLVDIDIF 180
  181 REAKKVIDAL KNREVASALT WCADNKTRLK KSKSKFEFQL RLQEFIELVR VDTAESYKKA 240
  241 IQYARKHLAS WGTTHMKELQ HVLATLAFKS TTECSKYKVL FELRQWDVLV DQFKQEFCKL 300
  301 YGMTMEPLLN IYLQAGLSAL KTPYGLEEGC TKEDPLSQEN FRKLALPLPF SKQHHSKLVC 360
  361 YISKELMDTE NPPQVLPNGY VYSTKALKEM AEKNGGKITC PRTGLVCNYT ELVKAYIS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.39794
Match: 1fbvA
Description: Cbl; N-terminal domain of cbl (N-cbl); CBL
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
cytoskeletal protein binding 3.49668552859347 bayes_pls_golite062009
actin binding 3.42581365835039 bayes_pls_golite062009
binding 3.12724619324809 bayes_pls_golite062009
molecular transducer activity 2.73814202660947 bayes_pls_golite062009
signal transducer activity 2.73814202660947 bayes_pls_golite062009
protein binding 2.14586566310919 bayes_pls_golite062009
motor activity 2.12755976181034 bayes_pls_golite062009
structural constituent of muscle 1.91532696439966 bayes_pls_golite062009
actin filament binding 1.80156231889221 bayes_pls_golite062009
transcription regulator activity 1.79278689121507 bayes_pls_golite062009
microfilament motor activity 1.6616628020467 bayes_pls_golite062009
nucleic acid binding 1.59077352153329 bayes_pls_golite062009
DNA binding 1.49540318847431 bayes_pls_golite062009
tubulin binding 1.46254997073304 bayes_pls_golite062009
calcium ion binding 1.40919295397643 bayes_pls_golite062009
molecular adaptor activity 1.13202898933953 bayes_pls_golite062009
microtubule binding 1.02453072828852 bayes_pls_golite062009
myosin binding 0.946386272405561 bayes_pls_golite062009
transcription repressor activity 0.937092252245555 bayes_pls_golite062009
SH3/SH2 adaptor activity 0.9219530203998 bayes_pls_golite062009
transcription factor activity 0.862300124095671 bayes_pls_golite062009
structural molecule activity 0.800850121197479 bayes_pls_golite062009
small conjugating protein ligase activity 0.705770920427699 bayes_pls_golite062009
ubiquitin-protein ligase activity 0.704182213196292 bayes_pls_golite062009
kinase regulator activity 0.69502098407037 bayes_pls_golite062009
receptor binding 0.66447316916504 bayes_pls_golite062009
hydrolase activity 0.653894750660658 bayes_pls_golite062009
actin monomer binding 0.47945349585403 bayes_pls_golite062009
protein binding, bridging 0.370788151516215 bayes_pls_golite062009
actin-dependent ATPase activity 0.1582139439683 bayes_pls_golite062009
structural constituent of cytoskeleton 0.116648335890738 bayes_pls_golite062009

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