| Protein: | PNG1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 721 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PNG1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
584.0 | [0..1] | [721..1] |
|
Region A: Residues: [1-95] |
1 11 21 31 41 51
| | | | | |
1 MVARKFVVRH EDSSFDVDYN TEDGLEVLRF LIFSLTLVPP EEQKIVAEDD NRLVSDESDL 60
61 ASLSERLRLV SVGEDSVENS DAEMLKSDEE LARML
|
| Detection Method: |  |
| Confidence: | 22.045757 |
| Match: | 1wggA |
| Description: | Solution Structure of the N-terminal Ubiquitin-like Domain of Mouse Ubiquitin Specific Protease 14 (USP14) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 3.35791544110308 | bayes_pls_golite062009 |
| protein binding | 1.76858817153382 | bayes_pls_golite062009 |
| transcription regulator activity | 1.42747465816672 | bayes_pls_golite062009 |
| nucleic acid binding | 1.32707653701567 | bayes_pls_golite062009 |
| DNA binding | 1.22622447288034 | bayes_pls_golite062009 |
| ubiquitin-protein ligase activity | 1.06305624260388 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 0.840680932828114 | bayes_pls_golite062009 |
| tubulin binding | 0.32155419647016 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 0.278744221969394 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 0.27677508218431 | bayes_pls_golite062009 |
| hydrolase activity | 0.247201449341942 | bayes_pls_golite062009 |
| kinase activity | 0.246106919229274 | bayes_pls_golite062009 |
| transferase activity | 0.236208643697075 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.161641932505601 | bayes_pls_golite062009 |
| protein kinase activity | 0.066663774629124 | bayes_pls_golite062009 |
| microtubule binding | 0.0491025172192296 | bayes_pls_golite062009 |
| protein tag | 0.00311613478935058 | bayes_pls_golite062009 |
|
Region A: Residues: [96-420] |
1 11 21 31 41 51
| | | | | |
1 QAEEDAIMFQ QFVAARDNGE FEGRIRPYVS QVLMYEDPVR QDAARKTVPK DELEEKALVS 60
61 LAKEGNFEPS KEERDYAFLL QLLFWFKKSF RWVNEPPCDF CGNKTIGQGM GNPLTSELAY 120
121 GANRVEIYRC TMCPTTTRFP RYNDPLKLVE TKKGRCGEWA NCFTLYCRTF GYDSRLIMDF 180
181 TDHVWTECYS HSLKRWIHLD PCEGVYDKPM LYEKGWNKKL NYVIAISKDG VCDVTKRYTK 240
241 KWHEVLSRRT LTTESSLQDG LRTLTRERRR SLMFESLSKL ELRDRNEQEE LERNLHSADN 300
301 ASVSLPGRQS GDREWRIMRS EFGSD
|
| Detection Method: | |
| Confidence: | 86.0 |
| Match: | 2f4mA |
| Description: | The Mouse PNGase-HR23 Complex Reveals a Complete Remodulation of the Protein-Protein Interface Compared to its Yeast Orthologs |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [421-721] |
1 11 21 31 41 51
| | | | | |
1 ENSSVSSSSC PVRKCVDDHV TNIYDSFLPI LTQFVEDGLP VARTNEVLKM IKQVLVDLKN 60
61 APYKTRKARL TLDSDNSSSF PEQFLPALGD LLLALSLKSE RDTNGKSVTI SVDGKLTKTA 120
121 IALPVALDAL RELVADLSKY QNLNKDSLSF PLVKQNRVCS GSVLASGEEL PSGIATAAFD 180
181 GIQESKWEEP NGAKGCWIVY KTLYNQMHQL IAYELMSAND APERDPKDWI LEGSNDGGST 240
241 WCVLDKQTSQ VFEERFQRKS YKITTPGFQA NLFRFRFLSV RDVNSTSRLQ LGSIDLYRSH 300
301 Q
|
| Detection Method: | |
| Confidence: | 32.154902 |
| Match: | 2orxA |
| Description: | No description for 2orxA was found. |
