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View Structure Prediction Details

Protein: PURA_ARATH
Organism: Arabidopsis thaliana
Length: 490 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PURA_ARATH.

Description E-value Query
Range
Subject
Range
PURA_VIBCH - Adenylosuccinate synthetase OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)...
gi|254846847, gi... - gi|75828746|ref|ZP_00758091.1| COG0104: Adenylosuccinate synthase [Vibrio cholerae MO10], gi|2548511...
PURA_VIBCM - Adenylosuccinate synthetase OS=Vibrio cholerae serotype O1 (strain M66-2) GN=purA PE=3 SV=1
gi|121728998, gi... - gi|75814700|ref|ZP_00745258.1| COG0104: Adenylosuccinate synthase [Vibrio cholerae V52], gi|12172899...
gi|229507346, gi... - gi|229507346|ref|ZP_04396851.1| adenylosuccinate synthetase [Vibrio cholerae BX 330286], gi|22935485...
gi|229509731, gi... - gi|229509731|ref|ZP_04399212.1| adenylosuccinate synthetase [Vibrio cholerae B33], gi|229353205|gb|E...
gi|229345918, gi... - gi|229516855|ref|ZP_04406301.1| adenylosuccinate synthetase [Vibrio cholerae RC9], gi|229345918|gb|E...
gi|229606852, gi... - gi|229606852|ref|YP_002877500.1| adenylosuccinate synthetase [Vibrio cholerae MJ-1236], gi|229369507...
gi|124118192, gi... - gi|153223466|ref|ZP_01953889.1| adenylosuccinate synthetase [Vibrio cholerae MAK 757], gi|124118192|...
gi|153820226, gi... - gi|153820226|ref|ZP_01972893.1| adenylosuccinate synthetase [Vibrio cholerae NCTC 8457], gi|12650922...
PURA_VIBCH - Adenylosuccinate synthetase OS=Vibrio cholerae GN=purA PE=3 SV=3
730.0 [0..65] [490..1]

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Predicted Domain #1
Region A:
Residues: [1-490]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLSSLTLDS NPRFAVGGPY HRRYPPLHHP RSFVSCSAKR PAVSASLSVA ADSAATESLG  60
   61 RIGSLSQVSG VLGCQWGDEG KGKLVDILAQ HFDIVARCQG GANAGHTIYN SEGKKFALHL 120
  121 VPSGILNEDT TCVIGNGVVV HLPGLFKEID GLESNGVSCK GRILVSDRAH LLFDFHQEVD 180
  181 GLRESELAKS FIGTTKRGIG PAYSSKVIRN GIRVGDLRHM DTLPQKLDLL LSDAAARFQG 240
  241 FKYTPEMLRE EVEAYKRYAD RLEPYITDTV HFINDSISQK KKVLVEGGQA TMLDIDFGTY 300
  301 PFVTSSSPSA GGICTGLGIA PSVVGDLIGV VKAYTTRVGS GPFPTENLGT GGDLLRLAGQ 360
  361 EFGTTTGRPR RCGWLDIVAL KFSCQINGFA SLNLTKLDVL SDLNEIQLGV AYKRSDGTPV 420
  421 KSFPGDLRLL EELHVEYEVL PGWKSDISSV RNYSDLPKAA QQYVERIEEL VGVPIHYIGI 480
  481 GPGRDALIYK 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 1dj2A
Description: Adenylosuccinate synthetase, PurA
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
nucleobase, nucleoside, nucleotide kinase activity 3.66392587433723 bayes_pls_golite062009
binding 2.64537357529343 bayes_pls_golite062009
nucleotide kinase activity 2.24094813695083 bayes_pls_golite062009
nucleic acid binding 2.11222585187695 bayes_pls_golite062009
phosphotransferase activity, phosphate group as acceptor 1.96697952975573 bayes_pls_golite062009
DNA binding 1.7904783386531 bayes_pls_golite062009
transcription regulator activity 1.68903321260301 bayes_pls_golite062009
hydrogen ion transporting ATP synthase activity, rotational mechanism 1.24165037431695 bayes_pls_golite062009
purine ribonucleotide binding 1.1110976601505 bayes_pls_golite062009
ribonucleotide binding 1.11103644113672 bayes_pls_golite062009
purine nucleotide binding 1.1086792521709 bayes_pls_golite062009
nucleotide binding 1.1060655022247 bayes_pls_golite062009
catalytic activity 1.00104173493322 bayes_pls_golite062009
ATP binding 0.80197288940364 bayes_pls_golite062009
adenyl ribonucleotide binding 0.770085840885632 bayes_pls_golite062009
adenyl nucleotide binding 0.751575230566049 bayes_pls_golite062009
transcription factor activity 0.603758349693077 bayes_pls_golite062009
adenylate kinase activity 0.447752711852745 bayes_pls_golite062009
kinase activity 0.431162005044036 bayes_pls_golite062009
structural constituent of ribosome 0.396187998943318 bayes_pls_golite062009
translation regulator activity 0.29096092258568 bayes_pls_golite062009
hydrogen ion transmembrane transporter activity 0.277694966071518 bayes_pls_golite062009
translation factor activity, nucleic acid binding 0.274994961137851 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 0.250756824614616 bayes_pls_golite062009
protein binding 0.170837278876362 bayes_pls_golite062009
monovalent inorganic cation transmembrane transporter activity 0.126821629333317 bayes_pls_golite062009
helicase activity 0.0775311459068899 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
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