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View Structure Prediction Details

Protein: mek-2
Organism: Caenorhabditis elegans
Length: 387 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mek-2.

Description E-value Query
Range
Subject
Range
gi|157746373 - gi|157746373|ref|XP_001668282.1| Hypothetical protein CBG04190 [Caenorhabditis briggsae AF16]
gi|39595523, gi|... - gi|39595523|emb|CAE60561.1| Hypothetical protein CBG04190 [Caenorhabditis briggsae], gi|187036340|em...
287.0 [0..1] [387..1]

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Predicted Domain #1
Region A:
Residues: [1-68]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSGKRRNPL GLSLPPTVNE QSESGEATAE EATATVPLEE QLKKLGLTEP QTQRLSEFLQ  60
   61 VKEGIKEL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 23.30103
Match: 2pziA
Description: No description for 2pziA was found.

Predicted Domain #2
Region A:
Residues: [69-387]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SEDMLQTEGE LGHGNGGVVN KCVHRKTGVI MARKLVHLEI KPSVRQQIVK ELAVLHKCNS  60
   61 PFIVGFYGAF VDNNDISICM EYMDGLSLDI VLKKVGRLPE KFVGRISVAV VRGLTYLKDE 120
  121 IKILHRDVKP SNMLVNSNGE IKLCDFGVSG MLIDSMANSF VGTRSYMAPE RLTGSHYTIS 180
  181 SDIWSFGLSL VELLIGRYPV PAPSQAEYAT MFNVAENEIE LADSLEEPNY HPPSNPASMA 240
  241 IFEMLDYIVN GPPPTLPKRF FTDEVIGFVS KCLRKLPSER ATLKSLTADV FFTQYADHDD 300
  301 QGEFAVFVKG TINLPKLNP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 65.0
Match: 1s9jA
Description: X-ray structure of the human mitogen-activated protein kinase kinase 1 (MEK1) in a complex with ligand and MgATP
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
phosphotransferase activity, alcohol group as acceptor 5.49988294224815 bayes_pls_golite062009
protein kinase activity 5.4586557943719 bayes_pls_golite062009
kinase activity 5.3287080791198 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 4.96052051118534 bayes_pls_golite062009
cyclin-dependent protein kinase activity 4.62392503670521 bayes_pls_golite062009
protein serine/threonine kinase activity 4.46381887831481 bayes_pls_golite062009
transmembrane receptor protein tyrosine kinase activity 3.41480681854114 bayes_pls_golite062009
transmembrane receptor protein kinase activity 3.40140621607334 bayes_pls_golite062009
protein tyrosine kinase activity 2.8153155526437 bayes_pls_golite062009
phosphoinositide 3-kinase binding 2.79505438761262 bayes_pls_golite062009
binding 2.74863538127007 bayes_pls_golite062009
transmembrane receptor activity 2.59526003830791 bayes_pls_golite062009
signal transducer activity 2.40586892801446 bayes_pls_golite062009
molecular transducer activity 2.40586892801446 bayes_pls_golite062009
receptor activity 2.39311927684508 bayes_pls_golite062009
transferase activity 2.34875558765742 bayes_pls_golite062009
protein binding 2.276111749106 bayes_pls_golite062009
ion transmembrane transporter activity 2.25301480460598 bayes_pls_golite062009
cation transmembrane transporter activity 2.188721764136 bayes_pls_golite062009
tubulin binding 2.18641675163967 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 2.12618184009486 bayes_pls_golite062009
receptor signaling protein activity 2.10379226653669 bayes_pls_golite062009
ATP binding 1.97600611746091 bayes_pls_golite062009
adenyl ribonucleotide binding 1.93596671856664 bayes_pls_golite062009
MAP kinase 2 activity 1.93464174962664 bayes_pls_golite062009
adenyl nucleotide binding 1.90928021591891 bayes_pls_golite062009
microtubule binding 1.88110801192607 bayes_pls_golite062009
receptor signaling protein serine/threonine kinase activity 1.81249386965144 bayes_pls_golite062009
PTB domain binding 1.69692410125184 bayes_pls_golite062009
purine ribonucleotide binding 1.65732943334212 bayes_pls_golite062009
ribonucleotide binding 1.65726906484847 bayes_pls_golite062009
metal ion transmembrane transporter activity 1.65350201428136 bayes_pls_golite062009
purine nucleotide binding 1.63763394711025 bayes_pls_golite062009
nucleotide binding 1.63195828048121 bayes_pls_golite062009
insulin receptor substrate binding 1.62657794525303 bayes_pls_golite062009
transcription regulator activity 1.56748951434625 bayes_pls_golite062009
growth factor binding 1.53863828216563 bayes_pls_golite062009
nucleic acid binding 1.46547714006072 bayes_pls_golite062009
JUN kinase kinase kinase activity 1.45392497707807 bayes_pls_golite062009
MAP kinase kinase activity 1.42275431028856 bayes_pls_golite062009
DNA binding 1.35333135345112 bayes_pls_golite062009
general RNA polymerase II transcription factor activity 1.28428643482914 bayes_pls_golite062009
kinase binding 1.26086833316556 bayes_pls_golite062009
cytoskeletal protein binding 1.22172815474021 bayes_pls_golite062009
catalytic activity 1.21655087018101 bayes_pls_golite062009
actin-dependent ATPase activity 1.21636393741109 bayes_pls_golite062009
structural constituent of muscle 1.19908793854422 bayes_pls_golite062009
transcription elongation regulator activity 1.16995153203536 bayes_pls_golite062009
transcription repressor activity 1.14496167267281 bayes_pls_golite062009
histone kinase activity (H3-S10 specific) 1.14432210832726 bayes_pls_golite062009
transporter activity 1.11833481501707 bayes_pls_golite062009
transcription factor activity 1.10928254946881 bayes_pls_golite062009
transmembrane receptor protein serine/threonine kinase activity 1.10045286406485 bayes_pls_golite062009
transforming growth factor beta receptor activity 1.10045286406485 bayes_pls_golite062009
JUN kinase kinase kinase kinase activity 1.08910497299188 bayes_pls_golite062009
protein kinase binding 1.06030596516506 bayes_pls_golite062009
transcription activator activity 0.997272622653026 bayes_pls_golite062009
receptor binding 0.990272341309676 bayes_pls_golite062009
transmembrane transporter activity 0.97575992765505 bayes_pls_golite062009
insulin-like growth factor receptor binding 0.872782211382796 bayes_pls_golite062009
MAP kinase activity 0.81943579965027 bayes_pls_golite062009
cation channel activity 0.752655339263581 bayes_pls_golite062009
fibroblast growth factor receptor activity 0.75189004129952 bayes_pls_golite062009
fibroblast growth factor binding 0.728507215600658 bayes_pls_golite062009
growth factor activity 0.707777793848936 bayes_pls_golite062009
telethonin binding 0.564849360244591 bayes_pls_golite062009
fibroblast growth factor 1 binding 0.537170519944039 bayes_pls_golite062009
protein serine/threonine/tyrosine kinase activity 0.48345772948903 bayes_pls_golite062009
enzyme binding 0.46284745266176 bayes_pls_golite062009
actin binding 0.456340967230669 bayes_pls_golite062009
substrate-specific transporter activity 0.451090007290896 bayes_pls_golite062009
glycosaminoglycan binding 0.442502307901785 bayes_pls_golite062009
protein kinase C activity 0.41587987561486 bayes_pls_golite062009
RNA polymerase II transcription factor activity 0.401250804041384 bayes_pls_golite062009
magnesium ion binding 0.393328812780268 bayes_pls_golite062009
MAP kinase kinase kinase activity 0.37115026509016 bayes_pls_golite062009
polysaccharide binding 0.344522125452779 bayes_pls_golite062009
heparin binding 0.334438853447262 bayes_pls_golite062009
structure-specific DNA binding 0.318153468064373 bayes_pls_golite062009
insulin receptor binding 0.266450215230107 bayes_pls_golite062009
substrate-specific channel activity 0.26579358730346 bayes_pls_golite062009
protein complex binding 0.239339759110451 bayes_pls_golite062009
SH2 domain binding 0.226760162354251 bayes_pls_golite062009
cell adhesion molecule binding 0.150740450460731 bayes_pls_golite062009
activin binding 0.13882559598219 bayes_pls_golite062009
insulin-like growth factor binding 0.0364367558658403 bayes_pls_golite062009
MAP kinase kinase kinase kinase activity 0.01826424351081 bayes_pls_golite062009
nucleoside-triphosphatase activity 0.0040394359628233 bayes_pls_golite062009

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