YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: daf-1
Organism: Caenorhabditis elegans
Length: 669 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for daf-1.

Description E-value Query
Range
Subject
Range
daf-1 - protein kinase status:Partially_confirmed UniProt:P20792 protein_id:AAC19189.2
421.0 [0..1] [669..1]

Back

Predicted Domain #1
Region A:
Residues: [1-270]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRIRHVVFCL LALVYGAETS DDDLDERTNI FIRDKLIPAL KLAEVTKVNF TRLHLCHCSR  60
   61 EVGCNARTTG WVPGIEFLNE TDRSFYENTC YTDGSCYQSA RPSPEISHFG CMDEKSVTDE 120
  121 TEFHDTAAKV CTNNTKDPHA TVWICCDKGN FCANETIIHL APGPQQSSTW LILTILALLT 180
  181 FIVLLGIAIF LTRKSWEAKF DWYIRFKPKP GDPLRETENN VPMVTMGDGA GSSVPEVAPI 240
  241 EQQGSTMSTS AGNSFPPGIM PNNMKDMLDV 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.69897
Match: 1igrA
Description: Type 1 insulin-like growth factor receptor extracellular domain; Type 1 insulin-like growth factor receptor Cys-rich domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
growth factor binding 6.33296746316446 bayes_pls_golite062009
insulin-like growth factor binding 4.12271516631296 bayes_pls_golite062009
insulin-like growth factor I binding 3.14198260332974 bayes_pls_golite062009
binding 3.10942625145915 bayes_pls_golite062009
protein binding 3.04595153576805 bayes_pls_golite062009
transmembrane receptor activity 2.11274485218746 bayes_pls_golite062009
receptor activity 2.04770371945982 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 1.83752933098717 bayes_pls_golite062009
kinase activity 1.80864815034082 bayes_pls_golite062009
signal transducer activity 1.716940423168 bayes_pls_golite062009
molecular transducer activity 1.716940423168 bayes_pls_golite062009
enzyme regulator activity 1.68559458458962 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 1.6818630115957 bayes_pls_golite062009
protein kinase activity 1.64316913174221 bayes_pls_golite062009
enzyme activator activity 1.49158544951255 bayes_pls_golite062009
transferase activity 1.3977021765186 bayes_pls_golite062009
insulin-like growth factor II binding 1.38700019278498 bayes_pls_golite062009
protein tyrosine kinase activity 0.625443680166071 bayes_pls_golite062009
glycoprotein binding 0.41080910982871 bayes_pls_golite062009
catalytic activity 0.271811389148807 bayes_pls_golite062009
protein tyrosine phosphatase activator activity 0.193211593927368 bayes_pls_golite062009
phosphatase activator activity 0.0954126689202188 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [271-669]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LEETSGSGMG PTTLHKLTIG GQIRLTGRVG SGRFGNVSRG DYRGEAVAVK VFNALDEPAF  60
   61 HKETEIFETR MLRHPNVLRY IGSDRVDTGF VTELWLVTEY HPSGSLHDFL LENTVNIETY 120
  121 YNLMRSTASG LAFLHNQIGG SKESNKPAMA HRDIKSKNIM VKNDLTCAIG DLGLSLSKPE 180
  181 DAASDIIANE NYKCGTVRYL APEILNSTMQ FTVFESYQCA DVYSFSLVMW ETLCRCEDGD 240
  241 VLPREAATVI PYIEWTDRDP QDAQMFDVVC TRRLRPTENP LWKDHPEMKH IMEIIKTCWN 300
  301 GNPSARFTSY ICRKRMDERQ QLLLDKKAKA VAQTAGVTVQ DRKILGPQKP KDESPANGAP 360
  361 RIVQKEIDRE DEQENWRETA KTPNGHISSN DDSSRPLLG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 66.522879
Match: 1b6cB
Description: Type I TGF-beta receptor R4
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
activin receptor activity 9.43409082112081 bayes_pls_golite062009
activin binding 7.11944534332244 bayes_pls_golite062009
receptor signaling protein serine/threonine kinase activity 6.41728494915949 bayes_pls_golite062009
activin receptor activity, type I 6.1393596497059 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 5.49988294224815 bayes_pls_golite062009
protein kinase activity 5.4586557943719 bayes_pls_golite062009
kinase activity 5.3287080791198 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 4.96052051118534 bayes_pls_golite062009
protein serine/threonine kinase activity 4.46381887831481 bayes_pls_golite062009
transferase activity 3.97138602499442 bayes_pls_golite062009
transmembrane receptor protein kinase activity 3.40140621607334 bayes_pls_golite062009
transmembrane receptor protein serine/threonine kinase activity 3.37600307408153 bayes_pls_golite062009
transforming growth factor beta receptor activity 3.37600307408153 bayes_pls_golite062009
transmembrane receptor activity 3.1965684217331 bayes_pls_golite062009
transmembrane receptor protein tyrosine kinase activity 2.97315540587667 bayes_pls_golite062009
receptor activity 2.96273889901429 bayes_pls_golite062009
molecular transducer activity 2.85730457922199 bayes_pls_golite062009
signal transducer activity 2.85730457922199 bayes_pls_golite062009
protein tyrosine kinase activity 2.8153155526437 bayes_pls_golite062009
binding 2.74863538127007 bayes_pls_golite062009
growth factor binding 2.61235080252818 bayes_pls_golite062009
transforming growth factor beta receptor activity, type I 2.57601476622612 bayes_pls_golite062009
protein binding 2.276111749106 bayes_pls_golite062009
follistatin binding 2.2292685945544 bayes_pls_golite062009
tubulin binding 2.18641675163967 bayes_pls_golite062009
receptor signaling protein activity 2.10379226653669 bayes_pls_golite062009
fibroblast growth factor binding 2.00819948109978 bayes_pls_golite062009
ATP binding 1.97600611746091 bayes_pls_golite062009
adenyl ribonucleotide binding 1.93596671856664 bayes_pls_golite062009
insulin receptor activity 1.91768456749814 bayes_pls_golite062009
adenyl nucleotide binding 1.90928021591891 bayes_pls_golite062009
microtubule binding 1.88110801192607 bayes_pls_golite062009
fibroblast growth factor 1 binding 1.82118598657067 bayes_pls_golite062009
purine ribonucleotide binding 1.65732943334212 bayes_pls_golite062009
ribonucleotide binding 1.65726906484847 bayes_pls_golite062009
purine nucleotide binding 1.63763394711025 bayes_pls_golite062009
nucleotide binding 1.63195828048121 bayes_pls_golite062009
transcription regulator activity 1.56748951434625 bayes_pls_golite062009
transforming growth factor beta binding 1.46877913443522 bayes_pls_golite062009
nucleic acid binding 1.46547714006072 bayes_pls_golite062009
MAP kinase kinase activity 1.42275431028856 bayes_pls_golite062009
DNA binding 1.35333135345112 bayes_pls_golite062009
phosphoinositide 3-kinase binding 1.30850950497296 bayes_pls_golite062009
catalytic activity 1.21655087018101 bayes_pls_golite062009
PTB domain binding 1.14009984975509 bayes_pls_golite062009
transporter activity 1.11833481501707 bayes_pls_golite062009
transcription factor activity 1.10928254946881 bayes_pls_golite062009
insulin binding 1.03564126441771 bayes_pls_golite062009
SMAD binding 1.02108562119195 bayes_pls_golite062009
transcription activator activity 0.997272622653026 bayes_pls_golite062009
transmembrane transporter activity 0.97575992765505 bayes_pls_golite062009
MAP kinase activity 0.81943579965027 bayes_pls_golite062009
amine binding 0.783881819862438 bayes_pls_golite062009
cytoskeletal protein binding 0.748533008006377 bayes_pls_golite062009
substrate-specific transporter activity 0.705905455086486 bayes_pls_golite062009
insulin receptor substrate binding 0.57617745233877 bayes_pls_golite062009
cyclin-dependent protein kinase activity 0.499492353295369 bayes_pls_golite062009
protein serine/threonine/tyrosine kinase activity 0.48345772948903 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 0.450699332958421 bayes_pls_golite062009
RNA polymerase II transcription factor activity 0.401250804041384 bayes_pls_golite062009
magnesium ion binding 0.393328812780268 bayes_pls_golite062009
MAP kinase kinase kinase activity 0.37115026509016 bayes_pls_golite062009
transforming growth factor beta receptor activity, type II 0.365530951355731 bayes_pls_golite062009
fibroblast growth factor receptor activity 0.34434685718027 bayes_pls_golite062009
peptide hormone binding 0.312169974523858 bayes_pls_golite062009
kinase binding 0.26752427107238 bayes_pls_golite062009
protein complex binding 0.239339759110451 bayes_pls_golite062009
cytokine binding 0.17817111033393 bayes_pls_golite062009
cell adhesion molecule binding 0.150740450460731 bayes_pls_golite062009
ion transmembrane transporter activity 0.148194101970458 bayes_pls_golite062009
receptor serine/threonine kinase binding 0.0123645889643007 bayes_pls_golite062009
protein kinase binding 0.00674998152095019 bayes_pls_golite062009
nucleoside-triphosphatase activity 0.0040394359628233 bayes_pls_golite062009
SH2 domain binding 2.96656737540424E-4 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle