| Protein: | pcca-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 724 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for pcca-1.
| Description | E-value | Query Range |
Subject Range |
|
|
644.0 | [0..13] | [724..92] |
|
Region A: Residues: [1-544] |
1 11 21 31 41 51
| | | | | |
1 MLRAASSIRA VANRGLATAA VARPGVPLDE REGKEIYTTV GIDYNEPKFD KILIANRGEI 60
61 ACRVIKTARA MGIKTVAVHS DVDSNSLHVK MADEAVCVGE APTAKSYLRA DRILQAVEDT 120
121 GAQAVHPGYG FLSENTKFAA ELEKAGAKFI GPNSKAILDM GDKIHSKKIA TAARVSMIPG 180
181 YDGEIADEDM CVKVSRDIGY PVMIKASAGG GGKGMRVAWN DKQAREGYRL SKQEAASSFG 240
241 DDRMLVEKFI DNPRHIEMQV LCDKHGNALW LNERECSIQR RNQKVIEEAP SSFVPPEMRR 300
301 KMGEQAVQLA KAVGYDSAGT VEFLVDSQRN FYFLEMNTRL QVEHPITECI TGIDIVQQML 360
361 RVSYGHPLPI TQEQVPLNGW AFESRVYAED PYKGFGLPSV GRLSRYVEPK HVDGVRCDSG 420
421 IREGSEISIY YDPLICKLVT HGDNREQALN RMQEALDNYV IRGVTHNIPL LRDIVQEKRF 480
481 RTGDITTKYL PEVYPEGFQG TSLSPKEQDV VIAFASALNA RKLARANQFL NQNKQRSTHV 540
541 ASFS
|
| Detection Method: |  |
| Confidence: | 139.0 |
| Match: | 2gpwA |
| Description: | No description for 2gpwA was found. |
| Term | Confidence | Notes |
| CoA carboxylase activity | 9.83581323285097 | bayes_pls_golite062009 |
| ligase activity, forming carbon-carbon bonds | 9.81059565938621 | bayes_pls_golite062009 |
| acetyl-CoA carboxylase activity | 9.76633430002009 | bayes_pls_golite062009 |
| ligase activity | 7.71401892529536 | bayes_pls_golite062009 |
| biotin carboxylase activity | 6.9547407447638 | bayes_pls_golite062009 |
| carbamoyl-phosphate synthase activity | 4.25267317906061 | bayes_pls_golite062009 |
| carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity | 4.17451795830682 | bayes_pls_golite062009 |
| methylcrotonoyl-CoA carboxylase activity | 2.98357921316004 | bayes_pls_golite062009 |
| catalytic activity | 2.5009559386228 | bayes_pls_golite062009 |
| ligase activity, forming carbon-nitrogen bonds | 2.20282197109991 | bayes_pls_golite062009 |
| succinate-CoA ligase activity | 2.14741613881765 | bayes_pls_golite062009 |
| CoA-ligase activity | 1.74681936947183 | bayes_pls_golite062009 |
| phosphoribosylaminoimidazole carboxylase activity | 1.57708889650281 | bayes_pls_golite062009 |
| acid-thiol ligase activity | 1.54123288984373 | bayes_pls_golite062009 |
| ligase activity, forming carbon-sulfur bonds | 1.25618100691869 | bayes_pls_golite062009 |
| carbon-nitrogen ligase activity, with glutamine as amido-N-donor | 1.11645327303429 | bayes_pls_golite062009 |
| phosphoribosylamine-glycine ligase activity | 1.04915286326924 | bayes_pls_golite062009 |
| glutathione binding | 1.01891534702164 | bayes_pls_golite062009 |
| propionyl-CoA carboxylase activity | 0.643677287269589 | bayes_pls_golite062009 |
| glutathione synthase activity | 0.197350998474496 | bayes_pls_golite062009 |
| succinate-CoA ligase (GDP-forming) activity | 0.07169743897532 | bayes_pls_golite062009 |
| succinate-CoA ligase (ADP-forming) activity | 0.034607288669523 | bayes_pls_golite062009 |
|
Region A: Residues: [545-647] |
1 11 21 31 41 51
| | | | | |
1 KTYKFVSSLP VKEGERPTEH AVEVEFVEGS ANKAQVRIGG KTVTISGDLN LSHPVNSIEV 60
61 DGEHITTQIV GKRAGEITVL YKGTPFKVKV LPEQAVKYLQ YMK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [648-724] |
1 11 21 31 41 51
| | | | | |
1 EKAKVDLSTV VLSPMPGAIK NVNVKPGDMV SEGQELVVME AMKMQNSLHA GKTGRVKAVN 60
61 VKVGATVDEG EVLVELE
|
| Detection Method: | |
| Confidence: | 15.09691 |
| Match: | 2d5dA |
| Description: | No description for 2d5dA was found. |
