| Protein: | CE01603 |
| Organism: | Caenorhabditis elegans |
| Length: | 573 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE01603.
| Description | E-value | Query Range |
Subject Range |
|
|
354.0 | [0..1] | [573..1] |
|
Region A: Residues: [1-480] |
1 11 21 31 41 51
| | | | | |
1 MAGRTLKKSA TAISDTLRRT FSSKTWEHRE QLHSLQEDNK FFLRKVRWQI ALLAHFGFAI 60
61 SFGIRSNFGV AKNRMINNFT DAYGEVHEKE FFWTGTEVGM MESSFFYGYA ASQIPAGVIA 120
121 AKFAPNKLFM LGILFASLLN IVTAICLNFH PFTDIFVMVI QVMQGLALGV CYPAMHGVWK 180
181 YWAPPLERSK LATTTFTGAS VGVMVGLPAS AYLVSHFSWS TPFYVFGALG IVWSILWIYV 240
241 SGTSPETHGY ISADEKKYIT EKVGSVAVKN MTLTTLPWRD MMTSTAVWAI IICSFCRSWS 300
301 FFLLLGNQLT YMKDVLHIDI KNSGLIAIFP QLGMCIVTLT SGQLSDYLRS SGKMSTEAVR 360
361 KSVNTFGFTV EAVMLGCLAF VRDPVIAVTF LIIACSGAGA VLSGFNVNHF DIAPRHAPIL 420
421 MGIANGLGAI AGVGGIVTNS LTYQNPDGWQ WVFLLAMSID IFGIIFFLIF AKGDVLPWAR 480
481
|
| Detection Method: |  |
| Confidence: | 56.0 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| substrate-specific transmembrane transporter activity | 5.46247398538901 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 4.58978526526921 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 4.31967711223954 | bayes_pls_golite062009 |
| transporter activity | 4.09176719149278 | bayes_pls_golite062009 |
| anion transmembrane transporter activity | 3.94605227012838 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.59744164024479 | bayes_pls_golite062009 |
| transmembrane transporter activity | 3.5865018981083 | bayes_pls_golite062009 |
| inorganic anion transmembrane transporter activity | 2.52916479889426 | bayes_pls_golite062009 |
| organic acid transmembrane transporter activity | 2.15783210522667 | bayes_pls_golite062009 |
| phosphate transmembrane transporter activity | 1.78662033436109 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 1.59419818573076 | bayes_pls_golite062009 |
| binding | 1.24199102205567 | bayes_pls_golite062009 |
| secondary active transmembrane transporter activity | 1.22264637452409 | bayes_pls_golite062009 |
| polyol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| alcohol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| glycerol transmembrane transporter activity | 0.812001619402678 | bayes_pls_golite062009 |
| symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| solute:cation symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| cation:sugar symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
| sugar:hydrogen symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
|
Region A: Residues: [481-573] |
1 11 21 31 41 51
| | | | | |
1 EPEKEETFNE FVRRMSTMVR SLSRRTRTRS TDTNYDKMEE ERVNSSEMKA CAKSDVPVPE 60
61 EGVLNETQAI GGSLEVVPEE PANKNLRTDR PEV
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
