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View Structure Prediction Details

Protein: SPCC757.12
Organism: Schizosaccharomyces pombe
Length: 625 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPCC757.12.

Description E-value Query
Range
Subject
Range
CDGT2_BACCI - Cyclomaltodextrin glucanotransferase OS=Bacillus circulans GN=cgt PE=1 SV=1
383.0 [0..5] [610..16]
gi|83758764 - gi|83758764|gb|ABC46587.1| amylase X [Paenibacillus sp. BL11]
gi|83758764 - gi|83758764|gb|ABC46587.1| amylase X [Paenibacillus sp. BL11]
377.0 [0..13] [610..24]
gi|142509, gi|98164 - pir||S09196 cyclomaltodextrin glucanotransferase (EC 2.4.1.19) precursor - Bacillus sp. (strain B101...
CDGT_BACS8 - Cyclomaltodextrin glucanotransferase OS=Bacillus sp. (strain B1018) GN=cgt PE=1 SV=1
374.0 [0..5] [610..16]

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Predicted Domain #1
Region A:
Residues: [1-489]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFSKIALFS LFALFGLPTS LAKSSEEWRD RIIYQVITDR FAVDSDNTPD CSFDDSSYCG  60
   61 GTWSGIRSKL DYIQGMGFNA IWISPVEKNL EGSYGSDGEA YHGYWNTDFT QLNEHFGSED 120
  121 DLIDLITDMH NRDMWIMFDA LANSMAIPGP TDNISYSNLV PFNDSSYFHP YCWIDYGSNN 180
  181 NTDIEDCWTG DDNVILADLD IESTNVADYL HEHIHDMVER YQIDGIRIDA VKQMNPEFFP 240
  241 NYTSAAGVFA IGEMFSYDPN VSCSVRNYLD SITSYPIRQG IEFAFNYTGA AFEYLQEIDT 300
  301 QFQQACEGQD MSVIGNFLEN HDLPRYTSIT NDTSQDIGAI VFLLLHTGIP IIYYGEEQRL 360
  361 PGGSDTPENR AALWNYGYDT DANYYQTIRT AIALRKQAIS DSDSWTTDSH SYLDYDLRHA 420
  421 VVRKGDVLGV YTNYESSSDN VTYDVSSNFD DGTVLREVLS NTTTTVGSSG ALHVTVVSGL 480
  481 PQVYYPEAS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 84.0
Match: 2taaA
Description: Fungal alpha-amylase; Fungal alpha-amylases
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity, acting on glycosyl bonds 5.36248919165223 bayes_pls_golite062009
glucan 1,3-beta-glucosidase activity 4.9497656520055 bayes_pls_golite062009
hydrolase activity, hydrolyzing O-glycosyl compounds 4.55801959095491 bayes_pls_golite062009
hydrolase activity 4.05312354194822 bayes_pls_golite062009
chitinase activity 4.02601525947212 bayes_pls_golite062009
glucosidase activity 3.48584664974971 bayes_pls_golite062009
beta-glucosidase activity 2.93854518942359 bayes_pls_golite062009
alpha-amylase activity 2.09193270404736 bayes_pls_golite062009
amylase activity 2.03484942782894 bayes_pls_golite062009
catalytic activity 1.85569074294201 bayes_pls_golite062009
transporter activity 1.28975867300692 bayes_pls_golite062009
binding 1.08189849662259 bayes_pls_golite062009
transmembrane transporter activity 1.06875155491269 bayes_pls_golite062009
hyalurononglucosaminidase activity 0.799539531748231 bayes_pls_golite062009
substrate-specific transporter activity 0.798668027833638 bayes_pls_golite062009
hexosaminidase activity 0.763360027922833 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 0.543615761700598 bayes_pls_golite062009
alpha-glucosidase activity 0.502835520523619 bayes_pls_golite062009
alpha-1,3-glucan synthase activity 0.434118980237671 bayes_pls_golite062009
beta-N-acetylhexosaminidase activity 0.369121784919131 bayes_pls_golite062009
carbohydrate binding 0.28185708488534 bayes_pls_golite062009
transferase activity, transferring hexosyl groups 0.266938437560648 bayes_pls_golite062009
active transmembrane transporter activity 0.247544462005515 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [490-625]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LTSFGNFLGT ATSYSSASAS YPSTSMSASL SSVHTSSATS SSKSSSSSSS RSGSSSSSSS  60
   61 RSGSTSSSGS SHTITSTSQS VHTSGSSTST SSVAVTSTAY SSSSSSSSSS SIESSANAVR 120
  121 VSILGVAAFI AIVLFI

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.43
Match: 2j63A
Description: No description for 2j63A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle