| Protein: | SPBC16G5.10 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 299 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC16G5.10.
| Description | E-value | Query Range |
Subject Range |
|
|
282.0 | [0..3] | [298..353] |
|
|
280.0 | [0..14] | [298..307] |
|
|
279.0 | [0..3] | [298..308] |
|
|
279.0 | [0..3] | [298..326] |
|
|
278.0 | [0..2] | [298..312] |
|
|
277.0 | [0..3] | [298..299] |
|
|
276.0 | [0..14] | [298..308] |
|
|
276.0 | [0..2] | [298..297] |
|
|
276.0 | [0..3] | [298..298] |
|
|
276.0 | [0..3] | [298..298] |
|
Region A: Residues: [1-299] |
1 11 21 31 41 51
| | | | | |
1 MQLSLPELSY THKSITEFEP AIRNDGRSID QLRPLSGQVD VLPGTNGSAR VKWASSVEIV 60
61 IGVKAEVGDA TPEGGKYVAS VEISPSVSIQ NRETDEIPSF LTSALQDLLN ALAVDYLKFT 120
121 PSKAWIIHVD AVVILSSSPY ENILSALSLA AYLALQTTRL PKISTPNVTD ITIGSTKYEP 180
181 SEEYDVDSEW ENALPLQGLE LMSVIILVSS IDQVIIVDPT IEESSVAQVT YAIGVQASGA 240
241 ISYTRVVGTG GGYASTGRAI TVERYIELLE TASTVGTKLL NASSDILSFK GLGFFDILP
|
| Detection Method: |  |
| Confidence: | 59.69897 |
| Match: | 1e3hA |
| Description: | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3; Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domains 1 and 4; Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 6; Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domains 2 and 5 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| exoribonuclease activity | 7.55877202113513 | bayes_pls_golite062009 |
| ribonuclease activity | 7.54644729272203 | bayes_pls_golite062009 |
| exoribonuclease activity, producing 5'-phosphomonoesters | 7.5310318714913 | bayes_pls_golite062009 |
| 3'-5'-exoribonuclease activity | 6.46930372693262 | bayes_pls_golite062009 |
| 3'-5' exonuclease activity | 4.29895100594643 | bayes_pls_golite062009 |
| exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | 3.83939403332553 | bayes_pls_golite062009 |
| exonuclease activity | 3.40686901061667 | bayes_pls_golite062009 |
| transcription regulator activity | 3.24341202600661 | bayes_pls_golite062009 |
| RNA binding | 2.47373172667773 | bayes_pls_golite062009 |
| hydrolase activity, acting on ester bonds | 1.71222144385878 | bayes_pls_golite062009 |
| structural constituent of ribosome | 1.52108547421872 | bayes_pls_golite062009 |
| nucleic acid binding | 1.45130233071198 | bayes_pls_golite062009 |
| binding | 1.38311294671926 | bayes_pls_golite062009 |
| structural molecule activity | 1.19756544622048 | bayes_pls_golite062009 |
| transcription termination factor activity | 1.01993495617192 | bayes_pls_golite062009 |
| DNA binding | 1.01454217691792 | bayes_pls_golite062009 |
| hydrolase activity | 0.722411371082264 | bayes_pls_golite062009 |
| carbohydrate kinase activity | 0.51810239718467 | bayes_pls_golite062009 |
| mRNA binding | 0.403794675006504 | bayes_pls_golite062009 |
| protein binding | 0.292595239533272 | bayes_pls_golite062009 |
| ATP-dependent peptidase activity | 0.1173709890655 | bayes_pls_golite062009 |
| catalytic activity | 0.10089766806364 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.0287026367466632 | bayes_pls_golite062009 |
