| Protein: | pst2 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 1075 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for pst2.
| Description | E-value | Query Range |
Subject Range |
|
|
1053.0 | [0..9] | [1073..155] |
|
|
1016.0 | [0..24] | [1065..518] |
|
|
1015.0 | [0..17] | [1067..423] |
|
|
1012.0 | [0..28] | [1054..278] |
|
|
995.0 | [0..31] | [1070..468] |
|
|
987.0 | [0..30] | [1050..42] |
|
|
963.0 | [0..35] | [1050..5] |
|
|
962.0 | [0..8] | [1065..382] |
|
|
961.0 | [0..107] | [1062..906] |
|
Region A: Residues: [1-108] |
1 11 21 31 41 51
| | | | | |
1 MEQTLAILKN DNSTLVAEMQ NQLVHDFSPN GTALPELDIK AFVQKLGQRL CHRPYVYSAF 60
61 MDVVKALHNE IVDFPGFIER ISVILRDYPD LLEYLNIFLP SSYKYLLS
|
| Detection Method: |  |
| Confidence: | 29.0 |
| Match: | 2czyA |
| Description: | Solution structure of the NRSF/REST-mSin3B PAH1 complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [109-222] |
1 11 21 31 41 51
| | | | | |
1 NSGANFTLQF TTPSGPVSTP STYVATYNDL PCTYHRAIGF VSRVRRALLS NPEQFFKLQD 60
61 SLRKFKNSEC SLSELQTIVT SLLAEHPSLA HEFHNFLPSS IFFGSKPPLG SFPL
|
| Detection Method: | |
| Confidence: | 18.39794 |
| Match: | 2f05A |
| Description: | No description for 2f05A was found. |
| Term | Confidence | Notes |
| protein deacetylase activity | 9.15317765173842 | bayes_pls_golite062009 |
| histone deacetylase activity | 9.00540919224423 | bayes_pls_golite062009 |
| deacetylase activity | 7.91874136549804 | bayes_pls_golite062009 |
| hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 6.08470985892139 | bayes_pls_golite062009 |
| hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | 4.91057345050982 | bayes_pls_golite062009 |
| transcription repressor activity | 4.58162229232685 | bayes_pls_golite062009 |
| transcription regulator activity | 3.97924147512738 | bayes_pls_golite062009 |
| transcription corepressor activity | 3.71696410617503 | bayes_pls_golite062009 |
| transcription factor binding | 3.06004981994503 | bayes_pls_golite062009 |
| transcription cofactor activity | 2.96293930027313 | bayes_pls_golite062009 |
| DNA binding | 2.90699688513784 | bayes_pls_golite062009 |
| nucleic acid binding | 2.89854237920034 | bayes_pls_golite062009 |
| binding | 2.65480555250736 | bayes_pls_golite062009 |
| transcription factor activity | 2.07660852403223 | bayes_pls_golite062009 |
| protein binding | 1.46569798429756 | bayes_pls_golite062009 |
| transcription coactivator activity | 1.06494495723884 | bayes_pls_golite062009 |
| transcription activator activity | 0.63586266373929 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 0.599183685811182 | bayes_pls_golite062009 |
| catalytic activity | 0.289349813503192 | bayes_pls_golite062009 |
|
Region A: Residues: [223-318] |
1 11 21 31 41 51
| | | | | |
1 RGIQSSQFTL SNISDLLSQS RPDNLSPFSH LSNESSDFFK NVKNVLTDVE TYHEFLKLLN 60
61 LYVQGIIDRN ILVSRGFGFL KSNSGLWRSF LSLTSL
|
| Detection Method: | |
| Confidence: | 2.81 |
| Match: | 2cr7A |
| Description: | Solution structure of the first PAH domain of the mouse transcriptional repressor SIN3B |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [319-442] |
1 11 21 31 41 51
| | | | | |
1 SPEEFLSVYN SACSDFPECG PSYRLLPVEE RNISCSGRDD FAWGILNDDW VSHPTWASEE 60
61 SGFIVQRKTP YEEAMTKLEE ERYEFDRHIE ATSWTIKSLK KIQNRINELP EEERETYTLE 120
121 EGLG
|
| Detection Method: | |
| Confidence: | 64.585027 |
| Match: | PF08295.3 |
| Description: | No description for PF08295.3 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [443-703] |
1 11 21 31 41 51
| | | | | |
1 LPSKSIYKKT IKLVYTSEHA EEMFKALERM PCLTLPLVIS RLEEKNEEWK SVKRSLQPGW 60
61 RSIEFKNYDK SLDSQCVYFK ARDKKNVSSK FLLAEADILR SQAKLHFPLR SRSAFEFSFV 120
121 YDNEIVLFDT CYMVCTYIVC NSPSGLKKVE HFFKNILPLH FGLEKDKFSI FLDQVFRGPD 180
181 YDVNAPNIVG NKPVRRKRSN SITQLTEFVK QPKINGQRES RSAAAARKKE ESGNKSQSNS 240
241 QNSLSDESGN VTPVSKKQLS Q
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [704-797] |
1 11 21 31 41 51
| | | | | |
1 PAAAIKASLK YPSHPDSLLE HQDHAGDTEN EMHDDVDKEQ FGYSSMYVFF RLFNLLYERL 60
61 YELQRLEDQV SIIQQRIIPN PVSQKQKIWR DRWN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [798-932] |
1 11 21 31 41 51
| | | | | |
1 DLSDVPDEKT HYENTYVMIL RLIYGIVDQS AFEDYLRFYY GNKAYKIYTI DKLVWSAAKQ 60
61 VHHIVSDGKY KFVTSLVEQN SSASPKKNYD DFLYRLEIEK LLNPDEILFR FCWINKFKSF 120
121 GIKIMKRANL IVDQS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [933-1075] |
1 11 21 31 41 51
| | | | | |
1 LDTQRRVWKK YVQNYRIQKL TEEISYKNYR CPFLCRNIEK ERTVEQLVSR LQTKLLRSAE 60
61 LVSGLQAKLC LDSFKLLYLP RTEDSYIDAS YLRLRDTDFL DCQNKRKQRW RNRWESLLKS 120
121 VRGTSDNTAE VNFDADINAL FIP
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
