YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: aah3
Organism: Schizosaccharomyces pombe
Length: 564 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for aah3.

Description E-value Query
Range
Subject
Range
aah2 - alpha-amylase homolog Aah2
AMY2_SCHPO - Alpha-amylase 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=aah2 PE=1 SV=1
327.0 [0..4] [562..11]
gi|83758764 - gi|83758764|gb|ABC46587.1| amylase X [Paenibacillus sp. BL11]
gi|83758764 - gi|83758764|gb|ABC46587.1| amylase X [Paenibacillus sp. BL11]
322.0 [0..12] [557..24]
gi|11139208 - gi|11139208|gb|AAG31622.1|AF302787_1 cyclodextrin glucanotransferase [Bacillus circulans]
gi|108744018 - gi|108744018|gb|ABG02281.1| beta-cyclodextrin glycosyltransferase [Bacillus sp. N-227]
321.0 [0..12] [557..24]
gi|56419238, gi|... - gi|56419238|ref|YP_146556.1| alpha-cyclodextrinase [Geobacillus kaustophilus HTA426], gi|56379080|db...
320.0 [0..3] [488..112]
gi|51247884, gi|... - gi|51247889|pdb|1V3M|B Chain B, Crystal Structure Of F283y Mutant Cyclodextrin Glycosyltransferase C...
320.0 [0..16] [557..1]
gi|22129791 - gi|22129791|gb|AAL62457.2| alpha-cyclodextrinase [Thermus sp. YBJ-1]
320.0 [0..3] [488..112]
gi|15375096 - gi|15375096|dbj|BAB63955.1| alpha-cyclodextrinase [Geobacillus stearothermophilus]
320.0 [0..3] [488..112]

Back

Predicted Domain #1
Region A:
Residues: [1-564]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFGVYFVLLF LSSALIHVAN AGSNAEWRKR IIYQILTDRF AVDDGSTDNP CDPDANQYCG  60
   61 GTWKGIENKL DYIEDMGFNA IWISPIDKNI EGDIDGAGYA YHGYWNTDYE SLNEHFGTED 120
  121 DLVSLITAAH KAGIWVMLDS IVNSMALAPP LADADYSSLN PFNKESYFHP YCLIDWDITD 180
  181 NETNVMDCWQ DSGVLLADLD VESSDVSSYL SDHFKSLISK YDFDGLRIDA VKMMNYTFFP 240
  241 DFVDATGVYS VGEVFSYDPD TMCSYMSVLP GVTNYFLQLY INFSFTATGA GFTLIPTYQE 300
  301 VMASNCSKYD STLMLTFIEN HDLYRFPYYT SDQSQIMGAL SFVLIWDGIP SIFYGQEQGF 360
  361 NGGEDPANRP ALWLTDYDQS NPYYTVIKTM VAFRKFVITQ DPDWVTSTYQ SIESAVDHYV 420
  421 GQKNDVLVMF NNMGVTNNLT IYEVETNYTA NEVVSDVFGH RTLTVGADKT LTASMTNGYP 480
  481 LIMYPHSKMS GFTLPTVNRT VMPSTSATAT TTVYTSYYSP SYSARSFTGT GSIFTISSSS 540
  541 RLILSFKTLV FGLGVTAMLF VLFF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 82.045757
Match: 2guyA
Description: No description for 2guyA was found.

Predicted functions:

Term Confidence Notes
hydrolase activity, acting on glycosyl bonds 5.36248919165223 bayes_pls_golite062009
glucan 1,3-beta-glucosidase activity 4.9497656520055 bayes_pls_golite062009
hydrolase activity, hydrolyzing O-glycosyl compounds 4.55801959095491 bayes_pls_golite062009
hydrolase activity 4.05312354194822 bayes_pls_golite062009
chitinase activity 4.02601525947212 bayes_pls_golite062009
glucosidase activity 3.48584664974971 bayes_pls_golite062009
beta-glucosidase activity 2.93854518942359 bayes_pls_golite062009
alpha-amylase activity 2.09193270404736 bayes_pls_golite062009
amylase activity 2.03484942782894 bayes_pls_golite062009
catalytic activity 1.85569074294201 bayes_pls_golite062009
transporter activity 1.28975867300692 bayes_pls_golite062009
binding 1.08189849662259 bayes_pls_golite062009
transmembrane transporter activity 1.06875155491269 bayes_pls_golite062009
hyalurononglucosaminidase activity 0.799539531748231 bayes_pls_golite062009
substrate-specific transporter activity 0.798668027833638 bayes_pls_golite062009
hexosaminidase activity 0.763360027922833 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 0.543615761700598 bayes_pls_golite062009
alpha-glucosidase activity 0.502835520523619 bayes_pls_golite062009
alpha-1,3-glucan synthase activity 0.434118980237671 bayes_pls_golite062009
beta-N-acetylhexosaminidase activity 0.369121784919131 bayes_pls_golite062009
carbohydrate binding 0.28185708488534 bayes_pls_golite062009
transferase activity, transferring hexosyl groups 0.266938437560648 bayes_pls_golite062009
active transmembrane transporter activity 0.247544462005515 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle