YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: Klp10A-PB, Klp10...
Organism: Drosophila melanogaster
Length: 805 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Klp10A-PB, Klp10....

Description E-value Query
Range
Subject
Range
gi|109077382 - gi|109077382|ref|XP_001085185.1| PREDICTED: similar to Kinesin-like protein KIF2 [Macaca mulatta]
534.0 [0..3] [799..186]

Back

Predicted Domain #1
Region A:
Residues: [1-78]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDMITVGQSV KIKRTDGRVH MAVVAVINQS GKCITVEWYE RGETKGKEVE LDAILTLNPE  60
   61 LMQDTVEQHA APEPKKQA

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.954
Match: 2d9tA
Description: No description for 2d9tA was found.

Predicted functions:

Term Confidence Notes
binding 2.93612181084112 bayes_pls_golite062009
protein binding 2.69080109393279 bayes_pls_golite062009
histone methyltransferase activity 1.79861607404578 bayes_pls_golite062009
histone binding 1.746830567949 bayes_pls_golite062009
transcription regulator activity 1.46594794783423 bayes_pls_golite062009
chromatin binding 1.32829478506174 bayes_pls_golite062009
histone-lysine N-methyltransferase activity 1.27998129213016 bayes_pls_golite062009
protein-lysine N-methyltransferase activity 1.27998129213016 bayes_pls_golite062009
lysine N-methyltransferase activity 1.27998129213016 bayes_pls_golite062009
protein methyltransferase activity 0.990113007479941 bayes_pls_golite062009
DNA binding 0.710682357623342 bayes_pls_golite062009
nucleic acid binding 0.643238394474356 bayes_pls_golite062009
receptor binding 0.59769454195584 bayes_pls_golite062009
methylated histone residue binding 0.458031350737908 bayes_pls_golite062009
transcription factor binding 0.376980014085432 bayes_pls_golite062009
transcription repressor activity 0.332334374038733 bayes_pls_golite062009
transcription coactivator activity 0.236605370603502 bayes_pls_golite062009
transcription activator activity 0.2165774514892 bayes_pls_golite062009
transcription cofactor activity 0.185853674102466 bayes_pls_golite062009
N-methyltransferase activity 0.136409792702844 bayes_pls_golite062009
sequence-specific DNA binding 0.0778306537834457 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [79-174]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TAPMNLSRNP TQSAIGGNLT SRMTMAGNML NKIQESQSIP NPIVSSNSVN TNSNSNTTAG  60
   61 GGGGTTTSTT TGLQRPRYSQ AATGQQQTRI ASAVPN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [175-603]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NTLPNPSAAA SAGPAAQGVA TAATTQGAGG ASTRRSHALK EVERLKENRE KRRARQAEMK  60
   61 EEKVALMNQD PGNPNWETAQ MIREYQSTLE FVPLLDGQAV DDHQITVCVR KRPISRKEVN 120
  121 RKEIDVISVP RKDMLIVHEP RSKVDLTKFL ENHKFRFDYA FNDTCDNAMV YKYTAKPLVK 180
  181 TIFEGGMATC FAYGQTGSGK THTMGGEFNG KVQDCKNGIY AMAAKDVFVT LNMPRYRAMN 240
  241 LVVSASFFEI YSGKVFDLLS DKQKLRVLED GKQQVQVVGL TEKVVDGVEE VLKLIQHGNA 300
  301 ARTSGQTSAN SNSSRSHAVF QIVLRPQGST KIHGKFSFID LAGNERGVDT SSADRQTRME 360
  361 GAEINKSLLA LKECIRALGK QSAHLPFRVS KLTQVLRDSF IGEKSKTCMI AMISPGLSSC 420
  421 EHTLNTLRY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 101.0
Match: 2gryA
Description: No description for 2gryA was found.

Predicted Domain #4
Region A:
Residues: [604-805]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ADRVKELVVK DIVEVCPGGD TEPIEITDDE EEEELNMVHP HSHQLHPNSH APASQSNNQR  60
   61 APASHHSGAV IHNNNNNNNK NGNAGNMDLA MLSSLSEHEM SDELIVQHQA IDDLQQTEEM 120
  121 VVEYHRTVNA TLETFLAESK ALYNLTNYVD YDQDSYCKRG ESMFSQLLDI AIQCRDMMAE 180
  181 YRAKLAKEEM LSCSFNSPNG KR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 7.0
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle