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View Structure Prediction Details

Protein: su(r)-PC
Organism: Drosophila melanogaster
Length: 1031 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for su(r)-PC.

Description E-value Query
Range
Subject
Range
gi|66354366 - gi|66354366|gb|AAY44826.1| suppressor-of-rudimentary dihydropyrimidine dehydrogenase mutant [Drosoph...
726.0 [0..1] [1031..1]

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Predicted Domain #1
Region A:
Residues: [1-1031]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPPQLLSKD SPDIEDLLSL NPRVKTQCSV VPTKQTKENK KHWKRNADHA APPCTTLAND  60
   61 FSDIKHTTLS ERGALEEAAR CLKCADAPCQ KSCPTQLDIK SFITSIANKN FYGAAKAIFS 120
  121 DNPLGLTCGM VCPTSDLCVG GCNLQASEAG PINIGGLQQF ATEVFKKMGV RQRRTPQAEA 180
  181 NPLSQKIALV GGGPASLSCA TFLARLGYRD VTIYERRSYL GGLSAAEIPQ YRLPIDAVNF 240
  241 EIDLVRDLGV RIETGRSLGT KDLTIQGLLS TGHDAVFVGI GLPEPKLNPI FAGLQPSNGF 300
  301 YTSKNFLPLV SDGSKPGLCA CKAAAGLPKL HGNVIVLGAG DTAFDCATSA LRCGARRVFV 360
  361 VFRKGSSGIR AVPEEVELAR DERCELLPYL SPRKVIVKDG LITAMEFCRT EQNENDEWVE 420
  421 DEEQTQRLKA NFVISAFGSG LEDQDVKAAL APLQFRGELP VVDRVTMQSS VKQVFLGGDL 480
  481 AGVANTTVES VNDGKVAAWS IHCQLQGLPL DTPAALPLFY TDIDAVDISV EMCGIRFENP 540
  541 FGLASAPPTT STAMIRRAFE QGWGFVVTKT FGLDKDLVTN VSPRIVRGTT SGYKYGPQQG 600
  601 CFLNIELISE KRAEYWLKSI GELKRDFPEK IVIASIMCSF NEEDWTELAI KAEQSGADAL 660
  661 ELNLSCPHGM GERGMGLACG QDPELVEQIS RWVRKAVKLP FFIKLTPNIT DIVSIAAAAK 720
  721 RGGADGGSAI NTVQGLMGLK ADSTAWPAIG KEQRTTYGGV SGNATRPMAL KAISDIANRV 780
  781 PGFPILGIGG IDSGEVALQF IHAGATVLQI CSSVQNQDFT VIEDYCTALK ALLYLKANPP 840
  841 PVDGPFWDGQ SPPTPVHQKG KPVVRLTGEG KATLGFFGPY QRQRDIKMAE LRSQKGALWD 900
  901 AEQVKATPPA SNGAPNPAPR IKDVIGAALD KIGSYNKLDN KQQKVALIDD DMCINCGKCY 960
  961 MTCADSGYQA IEFDKDTHIP HVNDDCTGCT LCVSVCPIID CITMVPKKIP HVIKRGVEEK1020
 1021 IFYTHALSQC Q

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 1gt8A
Description: Dihydropyrimidine dehydrogenase, N-terminal domain; Dihydropyrimidine dehydrogenase, domain 4; Dihydropyrimidine dehydrogenase, domain 3; Dihydropyrimidine dehydrogenase, domain 2; Dihydropyrimidine dehydrogenase, C-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
glutamate synthase activity 8.25305391467034 bayes_pls_golite062009
glutamate synthase activity, NADH or NADPH as acceptor 8.23578981764913 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor 7.02480361242491 bayes_pls_golite062009
glutamate synthase (NADPH) activity 6.79992270958953 bayes_pls_golite062009
dihydropyrimidine dehydrogenase (NADP+) activity 4.09148795322957 bayes_pls_golite062009
pyrimidine binding 2.91784612612513 bayes_pls_golite062009
uracil binding 2.91784612612513 bayes_pls_golite062009
dihydroorotate dehydrogenase activity 2.73800716363956 bayes_pls_golite062009
dihydrouracil dehydrogenase (NAD+) activity 2.66245762632422 bayes_pls_golite062009
dihydroorotate oxidase activity 2.35584458985229 bayes_pls_golite062009
oxidoreductase activity 1.79641444157516 bayes_pls_golite062009
catalytic activity 1.56773888754354 bayes_pls_golite062009
antioxidant activity 1.31666452665754 bayes_pls_golite062009
oxidoreductase activity, acting on sulfur group of donors 0.985549379433495 bayes_pls_golite062009
electron carrier activity 0.868432848212603 bayes_pls_golite062009
aspartate oxidase activity 0.672303476807686 bayes_pls_golite062009
nucleobase binding 0.450556835399301 bayes_pls_golite062009
coenzyme binding 0.424849261981 bayes_pls_golite062009
hydrogen ion transmembrane transporter activity 0.310048858653841 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor 0.27791247084103 bayes_pls_golite062009
succinate dehydrogenase (ubiquinone) activity 0.27791247084103 bayes_pls_golite062009
oxidoreductase activity, acting on sulfur group of donors, NAD or NADP as acceptor 0.242456601435627 bayes_pls_golite062009
monovalent inorganic cation transmembrane transporter activity 0.229465315580407 bayes_pls_golite062009
binding 0.228983691415463 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
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