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View Structure Prediction Details

Protein: Pink1-PF, Pink1-...
Organism: Drosophila melanogaster
Length: 721 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Pink1-PF, Pink1-....

Description E-value Query
Range
Subject
Range
gi|15291429 - gi|15291429|gb|AAK92983.1| GH20931p [Drosophila melanogaster]
453.0 [0..1] [721..1]

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Predicted Domain #1
Region A:
Residues: [1-73]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVRLLTVRL IKHGRYILRS YCKRDIHANI LDQNQLKTRS KRGFPLPSTA ANVLRTTPQQ  60
   61 AAKSVVNVVP RTI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [74-649]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NSPSGSPFNG SGSSPTSSSG IFRVGQHARK LFIDNILSRV TTTYSEDLRQ RATRKLFFGD  60
   61 SAPFFALIGV SLASGSGVLS KEDELEGVCW EIREAASRLQ NAWNHDEISD TLDSKFTIDD 120
  121 LEIGPPIAKG CAAVVYAADF KKDVASDGAS LHTDAQPQAT PAFAPNSWST HEMMSPLQNM 180
  181 SRFVHNFGGS VDNVFHYSQP SAASDFVGAQ SREQDQRHHE QQQHQNQEQE QHQNQEPSSS 240
  241 AFNVTSPANS NINSSVDSYP LALKMMFNYD IQSNALSILR AMYKETVPAR QRGMNEAADE 300
  301 WERLLQNQTV HLPRHPNIVC MFGFFCDEVR NFPDGHLLYP VAQPQRINPQ GYGRNMSLYL 360
  361 LMKRYDHSLR GLLDSQDLST RNRILLLAQM LEAVNHLSRH GVAHRDLKSD NVLIELQDDA 420
  421 APVLVLSDFG CCLADKVHGL RLPYVSHDVD KGGNAALMAP EIFNTMPGPF AVLNYGKADL 480
  481 WACGALAYEI FGNRNPFYSS SGGMARERGE MTLSLRNSDY RQDQLPPMSD ACPPLLQQLV 540
  541 YNILNPNPSK RVSPDIAANV VQLFLWAPSN WLKAGG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 50.69897
Match: 2h8hA
Description: No description for 2h8hA was found.

Predicted functions:

Term Confidence Notes
binding 2.31930216202447 bayes_pls_golite062009
protein kinase activity 2.27692472025305 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 2.23108693748356 bayes_pls_golite062009
kinase activity 1.99734142164869 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 1.67960342775547 bayes_pls_golite062009
protein serine/threonine kinase activity 1.66424140461588 bayes_pls_golite062009
protein binding 1.22565748038754 bayes_pls_golite062009
transferase activity 0.876865688160088 bayes_pls_golite062009
molecular adaptor activity 0.657981592359252 bayes_pls_golite062009
SH3/SH2 adaptor activity 0.559549509453052 bayes_pls_golite062009
protein binding, bridging 0.370788151516215 bayes_pls_golite062009
ATP binding 0.205181355874813 bayes_pls_golite062009
adenyl nucleotide binding 0.197732414557721 bayes_pls_golite062009
adenyl ribonucleotide binding 0.190168978262683 bayes_pls_golite062009
nucleotide binding 0.0805563396143271 bayes_pls_golite062009
protein tyrosine kinase activity 0.0526147456823359 bayes_pls_golite062009

Predicted Domain #3
Region A:
Residues: [650-721]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPNSPEILQW LLSLTTKIMC EGRPQMGAGL MPVASCGNRR AYVEYLLICS FLARARLRRI  60
   61 RGALNWIQNV VA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 70.39794
Match: 1xjdA
Description: Crystal Structure of PKC-theta complexed with Staurosporine at 2A resolution
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle