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View Structure Prediction Details

Protein: CG11403-PA
Organism: Drosophila melanogaster
Length: 861 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG11403-PA.

Description E-value Query
Range
Subject
Range
gi|73997803 - gi|73997803|ref|XP_543872.2| PREDICTED: similar to DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 [...
555.0 [0..13] [861..8]

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Predicted Domain #1
Region A:
Residues: [1-861]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQYTPNQRL DTPGAQEFGF PYSPYEIQEQ LMQELFQVLE RGQVGIFESP TGTGKSLTLT  60
   61 CGALTWLARH EELVRTEMLA RIRGVEQELA KLKEESEQSS NWLESQGKSR AQRAELLRLQ 120
  121 HLQALLDKQE QQLDQIRKGA KKHKRQGRVH PGKLEELEKD LDPESDSDSE HETADGPQEA 180
  181 AEDRYRPVQI FFCSRTHSQL AQIVAELRKT PHGQSVRSIS LGSRQQLCGN PAVRKLKHVG 240
  241 LMNERCLDMA TKKARPNPSK KSRLTAEANS RCPFKAASLV ESLRDLALTE PLDIEELANE 300
  301 GTACGGCSYY ASRSAVEHAQ LILLPYQLLL QKSARNQLGI SLKGSIVIVD EAHNLLDSVA 360
  361 QLHGSEISRQ QLERAKVQIS GYKDHFQKRF TTKNLLKINQ IIFIIRRLLK ILDQRKELQS 420
  421 NGCSMMRTYE LTAEGDFFNI DLCELLDFCA RTRFARKVQG RADRMEREPR PSENQAPVST 480
  481 ARSLILQRLA SEQKLKEKTK SVKRRVEDIN KEDKAEELQE QQKPTKKPVE EVAPSPIRPL 540
  541 LAFLETLTSN AEDGRILVDP VGGTLKYILL DPAEQFADIV AEARAIVIAG GTMQPTKELK 600
  601 EQLFTGCHDR LVERFYNHVV ANDAILPFVI SNGPSGAPLS FKFAHRGSAE MLRELSMILR 660
  661 NLCQVVPGGV VCFLPSYEYL DKVYKYLEQS GTLETISGRK SVFREVSGSA EQLLDNYALA 720
  721 IKRPASYGAL LLSVVGGKLS EGLNFADDLG RAVLVVGLPY SNSLSPELRQ RMQHLDEKLG 780
  781 PGAGNEYYEN LCVKAVNQCI GRAVRHIKDY ACVYLLDKRF ADPKIRGKLP KWISRHIVEA 840
  841 NAANGGFGAV QGRTARFFKG R

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.43
Match: 2p6rA
Description: No description for 2p6rA was found.

Predicted functions:

Term Confidence Notes
binding 2.5815673740955 bayes_pls_golite062009
DNA-dependent ATPase activity 2.51056345830226 bayes_pls_golite062009
nucleic acid binding 2.48860356580237 bayes_pls_golite062009
transcription regulator activity 2.12472659433935 bayes_pls_golite062009
DNA binding 2.11486163652443 bayes_pls_golite062009
DNA helicase activity 2.07805757910215 bayes_pls_golite062009
ATP-dependent DNA helicase activity 1.67733655597151 bayes_pls_golite062009
microtubule motor activity 1.60306634304093 bayes_pls_golite062009
motor activity 1.58540624011199 bayes_pls_golite062009
pyrophosphatase activity 1.53962350366788 bayes_pls_golite062009
helicase activity 1.47239452959713 bayes_pls_golite062009
structure-specific DNA binding 1.16901233264734 bayes_pls_golite062009
DNA-directed DNA polymerase activity 1.10767079010625 bayes_pls_golite062009
protein-DNA loading ATPase activity 1.08879865673064 bayes_pls_golite062009
DNA polymerase activity 1.07616364844317 bayes_pls_golite062009
double-stranded DNA binding 0.991867487042149 bayes_pls_golite062009
ATP-dependent helicase activity 0.962068859908115 bayes_pls_golite062009
purine NTP-dependent helicase activity 0.962068859908115 bayes_pls_golite062009
catalytic activity 0.942640875796745 bayes_pls_golite062009
transcription factor activity 0.927390204819289 bayes_pls_golite062009
DNA clamp loader activity 0.921329005784985 bayes_pls_golite062009
transcription repressor activity 0.908099102618053 bayes_pls_golite062009
single-stranded DNA binding 0.49639867125315 bayes_pls_golite062009
DNA strand annealing activity 0.270438185987508 bayes_pls_golite062009
protein binding 0.201869978778282 bayes_pls_golite062009
mismatched DNA binding 0.143486155092556 bayes_pls_golite062009
structural constituent of ribosome 0.0988428757344488 bayes_pls_golite062009
histone methyltransferase activity (H3-K9 specific) 0.0566193386200338 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle