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View Structure Prediction Details

Protein: FBpp0303030, CG5...
Organism: Drosophila melanogaster
Length: 211 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0303030, CG5....

Description E-value Query
Range
Subject
Range
gi|40215537 - gi|40215537|gb|AAL48064.2| RE69454p [Drosophila melanogaster]
178.0 [0..1] [211..15]

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Predicted Domain #1
Region A:
Residues: [1-211]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAGKRGALI IFEGCDRSGK TTQSRLLVEL LKSKGIPTLP MNFPERSSSI GQVINSYLTN  60
   61 SKDLPDEVIH LMFSANRWEH INQVKEKLLE GTTLVVDRYS FSGVAYSAAK GLDFDWCYAP 120
  121 ERGLIKPDAV FYLRAPPNDL THRGQYGKER YEKVEFQGRV AEVFNRICSK EGSYFHQFDA 180
  181 RQSVEDLHAQ IASITEELLP KVATRPLDTL S

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 38.154902
Match: 1e9fA
Description: Thymidylate kinase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
nucleobase, nucleoside, nucleotide kinase activity 3.66392587433723 bayes_pls_golite062009
hydrogen ion transporting ATP synthase activity, rotational mechanism 3.01286198424677 bayes_pls_golite062009
nucleotide kinase activity 2.24094813695083 bayes_pls_golite062009
kinase activity 2.0779386406753 bayes_pls_golite062009
hydrogen ion transmembrane transporter activity 2.06460241490722 bayes_pls_golite062009
binding 2.05253348982328 bayes_pls_golite062009
substrate-specific transporter activity 2.0114051513686 bayes_pls_golite062009
phosphotransferase activity, phosphate group as acceptor 1.96697952975573 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 1.92626167278464 bayes_pls_golite062009
monovalent inorganic cation transmembrane transporter activity 1.9136419736217 bayes_pls_golite062009
ion transmembrane transporter activity 1.6854386921174 bayes_pls_golite062009
inorganic cation transmembrane transporter activity 1.64467072658718 bayes_pls_golite062009
cation transmembrane transporter activity 1.5008821138859 bayes_pls_golite062009
nucleic acid binding 1.49633029954726 bayes_pls_golite062009
pyrophosphatase activity 1.49611313354225 bayes_pls_golite062009
DNA-dependent ATPase activity 1.2155186842031 bayes_pls_golite062009
helicase activity 1.16085745407703 bayes_pls_golite062009
catalytic activity 1.00104173493322 bayes_pls_golite062009
DNA binding 0.967303417236485 bayes_pls_golite062009
transcription regulator activity 0.748437190903548 bayes_pls_golite062009
DNA helicase activity 0.72881469450553 bayes_pls_golite062009
structure-specific DNA binding 0.720649395550746 bayes_pls_golite062009
ATP-dependent helicase activity 0.59513742813869 bayes_pls_golite062009
purine NTP-dependent helicase activity 0.59513742813869 bayes_pls_golite062009
double-stranded DNA binding 0.58862275163252 bayes_pls_golite062009
adenylate kinase activity 0.447752711852745 bayes_pls_golite062009
CTP synthase activity 0.435702031552231 bayes_pls_golite062009
protein-DNA loading ATPase activity 0.3625050107782 bayes_pls_golite062009
DNA clamp loader activity 0.27925703205288 bayes_pls_golite062009
ATP-dependent DNA helicase activity 0.22150712609541 bayes_pls_golite062009
protein binding 0.193768631623192 bayes_pls_golite062009
nucleotide binding 0.114848452385726 bayes_pls_golite062009
purine nucleotide binding 0.10713474095071 bayes_pls_golite062009
purine ribonucleotide binding 0.0916519414118148 bayes_pls_golite062009
ribonucleotide binding 0.0915913646217636 bayes_pls_golite062009
DNA polymerase activity 4.95561462330096E-4 bayes_pls_golite062009

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