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View Structure Prediction Details

Protein: Nrk-PA
Organism: Drosophila melanogaster
Length: 724 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Nrk-PA.

Description E-value Query
Range
Subject
Range
gi|4104617 - gi|4104617|gb|AAD02091.1| receptor tyrosine kinase [Drosophila melanogaster]
686.0 [0..1] [724..1]

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Predicted Domain #1
Region A:
Residues: [1-139]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAGQWVGVV ERVLRGMVLK WGANLAVLGL CVFLFASATH ANSLNAIEEP VTRRHHQRHH  60
   61 EREREENGYC APYSGKVCKE YLTGQVWYSL EDPTGGWKNE QVTTALWDEL ISDLTGLCRE 120
  121 AAEKMLCAYA FPNCHMEGG

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.95
Match: 1ijyA
Description: Frizzled 8 (FZ8)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
transmembrane receptor activity 4.12744895314187 bayes_pls_golite062009
receptor activity 3.87682364042772 bayes_pls_golite062009
signal transducer activity 3.01939524477326 bayes_pls_golite062009
molecular transducer activity 3.01939524477326 bayes_pls_golite062009
Wnt receptor activity 2.31013454239678 bayes_pls_golite062009
binding 2.1646903962543 bayes_pls_golite062009
protein binding 2.08965369645498 bayes_pls_golite062009
Wnt-protein binding 1.42144939971845 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [140-285]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RAVKAPLCFE DCQATHLQFC YNDWVLIEEK KERNMFIKSR GHFRLPNCSS LPHYNASMRR  60
   61 PNCSYIGLTE LKESEVSYDC RNGNGRFYMG TMNVSKSGIP CQRWDTQYPH KHFQPPLVFH 120
  121 QLLEGENYCR NAGGEEPHPW CYTVDE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 25.39794
Match: 1ki0A
Description: Plasminogen
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
receptor activity 2.74055213309696 bayes_pls_golite062009
signal transducer activity 2.11223109564776 bayes_pls_golite062009
molecular transducer activity 2.11223109564776 bayes_pls_golite062009
binding 1.90408871052739 bayes_pls_golite062009
protein binding 1.52504676895038 bayes_pls_golite062009
hydrolase activity 0.946525235212821 bayes_pls_golite062009
catalytic activity 0.280235123429996 bayes_pls_golite062009

Predicted Domain #3
Region A:
Residues: [286-386]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SVRWQHCDIP MCPDYVDPNA VDLNTPIKME KFFTPSMIFL LAGIGFVAIV TLHLMILLVY  60
   61 KLSKHKDYSQ PAGAATAECS VSMRGGGDCG GNLNTSRETL G

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.154902
Match: 2ablA
Description: SH3-SH2 DOMAIN FRAGMENT OF HUMAN BCR-ABL TYROSINE KINASE
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
protein binding 3.13677730481089 bayes_pls_golite062009
binding 3.06905798270146 bayes_pls_golite062009
actin filament binding 2.59742039155224 bayes_pls_golite062009
cytoskeletal protein binding 2.21254869336424 bayes_pls_golite062009
signal transducer activity 1.80011194349017 bayes_pls_golite062009
molecular transducer activity 1.80011194349017 bayes_pls_golite062009
actin binding 1.79651396322487 bayes_pls_golite062009
vinculin binding 1.63216315345235 bayes_pls_golite062009
receptor binding 1.14419687627233 bayes_pls_golite062009
transporter activity 0.896907103596953 bayes_pls_golite062009
epidermal growth factor receptor binding 0.80673395326897 bayes_pls_golite062009
transmembrane transporter activity 0.713068405985864 bayes_pls_golite062009
substrate-specific transporter activity 0.500685400112742 bayes_pls_golite062009
insulin receptor binding 0.275913005279959 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 0.272368655500689 bayes_pls_golite062009
ion transmembrane transporter activity 0.00318812576030902 bayes_pls_golite062009

Predicted Domain #4
Region A:
Residues: [387-724]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GNGNTNTLAK WGTIRSTATI HSNCVALTTV TNVSDAKGTK PNARLEKLEY PRGDIVYVRS  60
   61 LGQGAFGRVF QARAPGLVPD QEDLLVAVKM LKDDASDQMQ MDFEREACLL AEFDHPNIVR 120
  121 LLGVCALGRP MCLLFEYMAP GDLSEFLRAC SPYATHQAPT QDRLQLNELH LLQMAANIAA 180
  181 GMLYLSERKF VHRDLATRNC LINEHMAVKI ADFGLSHKIY LQDYYKGDEN DFIPIRWMPL 240
  241 ESILYNKFSL ESDVWAYGIC LWEVFSFALQ PYFGLTHEEV IKYIKEGNVL GCPDNTPLSV 300
  301 YALMRRCWNR KPSERPGFAE INHCIQHSIA ESECKAML

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 72.39794
Match: 1lufA
Description: Musk tyrosine kinase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
protein kinase activity 5.4586557943719 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 5.04467222534257 bayes_pls_golite062009
kinase activity 4.85903980916957 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 4.63692708178478 bayes_pls_golite062009
protein serine/threonine kinase activity 4.46381887831481 bayes_pls_golite062009
fibroblast growth factor 1 binding 4.09909681656699 bayes_pls_golite062009
stem cell factor receptor activity 3.82614202737632 bayes_pls_golite062009
transmembrane receptor protein tyrosine kinase activity 3.41480681854114 bayes_pls_golite062009
transmembrane receptor protein kinase activity 3.40140621607334 bayes_pls_golite062009
transmembrane receptor activity 3.1965684217331 bayes_pls_golite062009
receptor activity 2.96273889901429 bayes_pls_golite062009
molecular transducer activity 2.85730457922199 bayes_pls_golite062009
signal transducer activity 2.85730457922199 bayes_pls_golite062009
protein tyrosine kinase activity 2.8153155526437 bayes_pls_golite062009
binding 2.74863538127007 bayes_pls_golite062009
fibroblast growth factor receptor activity 2.70917101514973 bayes_pls_golite062009
growth factor binding 2.61235080252818 bayes_pls_golite062009
transferase activity 2.34875558765742 bayes_pls_golite062009
protein binding 2.276111749106 bayes_pls_golite062009
receptor signaling protein activity 2.10379226653669 bayes_pls_golite062009
ATP binding 1.97600611746091 bayes_pls_golite062009
adenyl ribonucleotide binding 1.93596671856664 bayes_pls_golite062009
adenyl nucleotide binding 1.90928021591891 bayes_pls_golite062009
fibroblast growth factor binding 1.9011085456623 bayes_pls_golite062009
phosphoinositide 3-kinase binding 1.82515074380651 bayes_pls_golite062009
receptor signaling protein serine/threonine kinase activity 1.81249386965144 bayes_pls_golite062009
non-membrane spanning protein tyrosine kinase activity 1.66669268613198 bayes_pls_golite062009
purine ribonucleotide binding 1.65732943334212 bayes_pls_golite062009
ribonucleotide binding 1.65726906484847 bayes_pls_golite062009
purine nucleotide binding 1.63763394711025 bayes_pls_golite062009
nucleotide binding 1.63195828048121 bayes_pls_golite062009
transforming growth factor beta receptor activity 1.51779793980227 bayes_pls_golite062009
transmembrane receptor protein serine/threonine kinase activity 1.51779793980227 bayes_pls_golite062009
kinase binding 1.26086833316556 bayes_pls_golite062009
catalytic activity 1.21655087018101 bayes_pls_golite062009
transcription regulator activity 1.10597058961079 bayes_pls_golite062009
nucleic acid binding 1.06086848160606 bayes_pls_golite062009
protein kinase binding 1.06030596516506 bayes_pls_golite062009
receptor binding 0.990272341309676 bayes_pls_golite062009
insulin receptor substrate binding 0.95914323793919 bayes_pls_golite062009
DNA binding 0.956433441855102 bayes_pls_golite062009
transcription activator activity 0.955593006663586 bayes_pls_golite062009
glycosaminoglycan binding 0.867779574651545 bayes_pls_golite062009
insulin-like growth factor binding 0.82854091092242 bayes_pls_golite062009
MAP kinase activity 0.81943579965027 bayes_pls_golite062009
transcription factor activity 0.790106588313006 bayes_pls_golite062009
platelet-derived growth factor receptor binding 0.770658204347392 bayes_pls_golite062009
transporter activity 0.710766490066447 bayes_pls_golite062009
growth factor activity 0.707777793848936 bayes_pls_golite062009
actin filament binding 0.66248865719696 bayes_pls_golite062009
MAP kinase kinase activity 0.610230065465794 bayes_pls_golite062009
transmembrane transporter activity 0.60324822483033 bayes_pls_golite062009
JUN kinase kinase kinase kinase activity 0.546647574638943 bayes_pls_golite062009
cytokine receptor binding 0.516151105278102 bayes_pls_golite062009
activin binding 0.510364757301021 bayes_pls_golite062009
cyclin-dependent protein kinase activity 0.499492353295369 bayes_pls_golite062009
enzyme binding 0.46284745266176 bayes_pls_golite062009
protein kinase C activity 0.41587987561486 bayes_pls_golite062009
magnesium ion binding 0.393328812780268 bayes_pls_golite062009
substrate-specific transporter activity 0.385603245903806 bayes_pls_golite062009
insulin receptor activity 0.359260732334699 bayes_pls_golite062009
polysaccharide binding 0.344522125452779 bayes_pls_golite062009
heparin binding 0.334438853447262 bayes_pls_golite062009
transforming growth factor beta binding 0.287757704969289 bayes_pls_golite062009
protein complex binding 0.239339759110451 bayes_pls_golite062009
transforming growth factor beta receptor activity, type I 0.233896787419349 bayes_pls_golite062009
cytokine binding 0.17817111033393 bayes_pls_golite062009
activin receptor activity 0.163693280420599 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 0.152203945257581 bayes_pls_golite062009
hydrolase activity 0.0498504410225162 bayes_pls_golite062009

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