| Protein: | gi|125541669 |
| Organism: | Oryza sativa Indica Group |
| Length: | 331 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|125541669.
| Description | E-value | Query Range |
Subject Range |
|
|
413.0 | [0..2] | [331..7] |
|
Region A: Residues: [1-222] |
1 11 21 31 41 51
| | | | | |
1 MSWCTIESDP GVFTELIQEM QVKGVQVEEL YSLDVDSISE LRPVYGLIFL FKWMAGEKDE 60
61 RPVVKDPNPN LFFASQVIPN ACATQAILSI LMNRPEIDIG PELSNLKEFT GAFAPDMKGL 120
121 AINNSDSIRT AHNSFARPEP FVSDEQRAAG KDDEVYHFIS YLPFEGVLYE LDGLKEGPIS 180
181 LGQCSGGPDD LDWLRMVQPV IQKRIERYSQ SEIRFNLMAI IK
|
| Detection Method: |  |
| Confidence: | 74.30103 |
| Match: | 1uchA |
| Description: | DEUBIQUITINATING ENZYME UCH-L3 (HUMAN) AT 1.8 ANGSTROM RESOLUTION |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| peptidase activity | 7.38847948226412 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 7.21002260103248 | bayes_pls_golite062009 |
| endopeptidase activity | 6.57191549077589 | bayes_pls_golite062009 |
| cysteine-type peptidase activity | 6.54685807643041 | bayes_pls_golite062009 |
| small conjugating protein-specific protease activity | 6.39247995905454 | bayes_pls_golite062009 |
| ubiquitin-specific protease activity | 5.91394445088241 | bayes_pls_golite062009 |
| hydrolase activity | 4.82615927403291 | bayes_pls_golite062009 |
| ubiquitin thiolesterase activity | 4.1832081096766 | bayes_pls_golite062009 |
| thiolester hydrolase activity | 2.96735553959103 | bayes_pls_golite062009 |
| SUMO-specific protease activity | 2.65263825059319 | bayes_pls_golite062009 |
| cysteine-type endopeptidase activity | 1.95802900199539 | bayes_pls_golite062009 |
| omega peptidase activity | 1.7955048939859 | bayes_pls_golite062009 |
| binding | 1.77258741259391 | bayes_pls_golite062009 |
| catalytic activity | 1.05972260874031 | bayes_pls_golite062009 |
| protein binding | 0.896934807256194 | bayes_pls_golite062009 |
| tubulin binding | 0.75490638344179 | bayes_pls_golite062009 |
| microtubule binding | 0.737305952322311 | bayes_pls_golite062009 |
| transporter activity | 0.69523261160023 | bayes_pls_golite062009 |
| NEDD8-specific protease activity | 0.687958315289315 | bayes_pls_golite062009 |
| ligase activity, forming carbon-nitrogen bonds | 0.495951820083869 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.467924587720185 | bayes_pls_golite062009 |
| nucleic acid binding | 0.439226369799415 | bayes_pls_golite062009 |
| transmembrane transporter activity | 0.439003000540428 | bayes_pls_golite062009 |
| signal transducer activity | 0.32811477573477 | bayes_pls_golite062009 |
| molecular transducer activity | 0.32811477573477 | bayes_pls_golite062009 |
| calcium-dependent cysteine-type endopeptidase activity | 0.196538841514154 | bayes_pls_golite062009 |
| DNA binding | 0.168761518285256 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.125654358663332 | bayes_pls_golite062009 |
| transferase activity | 0.0852393573521809 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.0241561776323942 | bayes_pls_golite062009 |
|
Region A: Residues: [223-331] |
1 11 21 31 41 51
| | | | | |
1 NRKDVYTAEL KELEKRRDQL LQEMNESSAA ESLNSELAEV TSAIETVSEK IIMEEEKFKK 60
61 WRTENIRRKH NYIPFLFNFL KMLAEKKQLK PLVEKAKQQK ASSTSTSAR
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
