| Protein: | Dscam-PAI |
| Organism: | Drosophila melanogaster |
| Length: | 2017 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Dscam-PAI.
| Description | E-value | Query Range |
Subject Range |
|
|
1528.0 | [0..3] | [2017..3] |
|
Region A: Residues: [1-143] |
1 11 21 31 41 51
| | | | | |
1 MNMPNERLKW LMLFAAVALI ACGSQTLAAN PPDADQKGPV FLKEPTNRID FSNSTGAEIE 60
61 CKASGNPMPE IIWIRSDGTA VGDVPGLRQI SSDGKLVFPP FRAEDYRQEV HAQVYACLAR 120
121 NQFGSIISRD VHVRAVVNQF YEA
|
| Detection Method: |  |
| Confidence: | 80.045757 |
| Match: | 2v5sA |
| Description: | No description for 2v5sA was found. |
|
Region A: Residues: [144-255] |
1 11 21 31 41 51
| | | | | |
1 EIMTEYVIRG NAAVLKCSIP SFVADFVRVE SWIDDEGNVL SFSDNYDGKY LVLPSGELHI 60
61 REVGPEDGYK SYQCRTKHRL TGETRLSATK GRLVITEPVG TVSPKISTGE DF
|
| Detection Method: | |
| Confidence: | 11.30103 |
| Match: | 1f3rB |
| Description: | Immunoglobulin light chain kappa variable domain, VL-kappa; Immunoglobulin heavy chain variable domain, VH |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| telethonin binding | 6.64811984458494 | bayes_pls_golite062009 |
| alpha-actinin binding | 5.77350124471385 | bayes_pls_golite062009 |
| actinin binding | 5.69539760434923 | bayes_pls_golite062009 |
| structural constituent of muscle | 4.93896503565413 | bayes_pls_golite062009 |
| olfactory receptor activity | 4.21057154107121 | bayes_pls_golite062009 |
| antigen binding | 4.06466268219034 | bayes_pls_golite062009 |
| binding | 3.17641566810715 | bayes_pls_golite062009 |
| receptor activity | 3.0754311615326 | bayes_pls_golite062009 |
| peptide antigen binding | 2.94721224577771 | bayes_pls_golite062009 |
| molecular transducer activity | 2.92683710723714 | bayes_pls_golite062009 |
| signal transducer activity | 2.92683710723714 | bayes_pls_golite062009 |
| fibroblast growth factor 1 binding | 2.83860944503193 | bayes_pls_golite062009 |
| transmembrane receptor activity | 2.79758224858792 | bayes_pls_golite062009 |
| protein binding | 2.22855404705168 | bayes_pls_golite062009 |
| IgG binding | 1.92633562075074 | bayes_pls_golite062009 |
| receptor binding | 1.70260377709721 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 1.58610597245454 | bayes_pls_golite062009 |
| actin binding | 1.42681407553255 | bayes_pls_golite062009 |
| cell adhesion molecule binding | 1.36789541796983 | bayes_pls_golite062009 |
| protein kinase activity | 1.36635494500222 | bayes_pls_golite062009 |
| nucleic acid binding | 1.32330470851159 | bayes_pls_golite062009 |
| fibroblast growth factor binding | 1.27793818082552 | bayes_pls_golite062009 |
| DNA binding | 1.19412627500732 | bayes_pls_golite062009 |
| myosin light chain kinase activity | 1.17845072849922 | bayes_pls_golite062009 |
| transcription regulator activity | 1.16252234499274 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 1.02286631988334 | bayes_pls_golite062009 |
| kinase activity | 0.929878054374821 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.878595022643164 | bayes_pls_golite062009 |
| fibroblast growth factor receptor activity | 0.84475532395276 | bayes_pls_golite062009 |
| actin filament binding | 0.760856470721016 | bayes_pls_golite062009 |
| growth factor binding | 0.715053526402219 | bayes_pls_golite062009 |
| immunoglobulin binding | 0.64138121404685 | bayes_pls_golite062009 |
| collagen binding | 0.635057461053063 | bayes_pls_golite062009 |
| titin binding | 0.599892148302011 | bayes_pls_golite062009 |
| integrin binding | 0.599569390248921 | bayes_pls_golite062009 |
| structural molecule activity | 0.567620977360967 | bayes_pls_golite062009 |
| protein serine/threonine kinase activity | 0.564762108830441 | bayes_pls_golite062009 |
| transcription factor activity | 0.54549168007511 | bayes_pls_golite062009 |
| myosin heavy chain binding | 0.49788128784685 | bayes_pls_golite062009 |
| protein complex binding | 0.43131084085213 | bayes_pls_golite062009 |
| protein tyrosine kinase activity | 0.318890055375093 | bayes_pls_golite062009 |
| immunoglobulin receptor activity | 0.117547357032989 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 0.0579247757286607 | bayes_pls_golite062009 |
| cell surface binding | 0.0515688920405171 | bayes_pls_golite062009 |
|
Region A: Residues: [256-910] |
1 11 21 31 41 51
| | | | | |
1 KHLKGKSSQD LSILCPAQAY PQPFFRWYKF IEGTTRKQAV VLNDRVKQVS GTLIIKDAVV 60
61 EDSGKYLCVV NNSVGGESVE TVLTVTAPLS AKIDPPTQTV DFGRPAVFTC QYTGNPIKTV 120
121 SWMKDGKAIG HSEPVLRIES VKKEDKGMYQ CFVRNDQESA EASAELKLGG RFDPPVIRQA 180
181 FQEETMEPGP SVFLKCVAGG NPTPEISWEL DGKKIANNDR YQVGQYVTVN GDVVSYLNIT 240
241 SVHANDGGLY KCIAKSKVGV AEHSAKLNVY GLPYIRQMEK KAIVAGETLI VTCPVAGYPI 300
301 DSIVWERDNR ALPINRKQKV FPNGTLIIEN VERNSDQATY TCVAKNQEGY SARGSLEVQV 360
361 MVPPSIAPFS FGDDPVNTGE NAGVQCMVQK GDVPITIKWT LNSRPIINGE EGITILKLSP 420
421 KTSVLNIAAV EQDHRGVFKC IAENKAGSSF TTSELKVNVP PRWILEPTDK AFAQGSDAKV 480
481 ECKADGFPKP QVTWKKAVGD TPGEYKDLKK SDNIRVEEGT LHVDNIQKTN EGYYLCEAIN 540
541 GIGSGLSAVI MISVQAPPEF TEKLRNQTAR RGEPAVLQCE AKGEKPIGIL WNMNNMRLDP 600
601 KNDNRYTIRE EILSTGVMSS LSIKRTERSD SALFTCVATN AFGSDDASIN MIVQE
|
| Detection Method: | |
| Confidence: | 58.69897 |
| Match: | 1e07A |
| Description: | Model of human carcinoembryonic antigen by homology modelling and curve-fitting to experimental solution scattering data |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [911-997] |
1 11 21 31 41 51
| | | | | |
1 VPEMPYALKV LDKSGRSVQL SWAQPYDGNS PLDRYIIEFK RSRASWSEID RVIVPGHTTE 60
61 AQVQKLSPAT TYNIRIVAEN AIGTSQS
|
| Detection Method: | |
| Confidence: | 36.0 |
| Match: | 2nziA |
| Description: | No description for 2nziA was found. |
|
Region A: Residues: [998-1111] |
1 11 21 31 41 51
| | | | | |
1 SEAVTIITAE EAPSGKPQNI KVEPVNQTTM RVTWKPPPRT EWNGEILGYY VGYKLSNTNS 60
61 SYVFETINFI TEEGKEHNLE LQNLRVYTQY SVVIQAFNKI GAGPLSEEEK QFTA
|
| Detection Method: | |
| Confidence: | 11.221849 |
| Match: | 2edxA |
| Description: | No description for 2edxA was found. |
|
Region A: Residues: [1112-1583] |
1 11 21 31 41 51
| | | | | |
1 EGTPSQPPSD TACTTLTSQT IRVGWVSPPL ESANGVIKTY KVVYAPSDEW YDETKRHYKK 60
61 TASSDTVLHG LKKYTNYTMQ VLATTAGGDG VRSVPIHCQT EPDVPEAPTD VKALVMGNAA 120
121 ILVSWRPPAQ PNGIITQYTV YSKAEGAETE TKTQKVPHYQ MSFEATELEK NKPYEFWVTA 180
181 STTIGEGQQS KSIVAMPSDQ VPAKIASFDD TFTATFKEDA KMPCLAVGAP QPEITWKIKG 240
241 VEFSANDRMR VLPDGSLLIK SVNRQDAGDY SCHAENSIAK DSITHKLIVL APPQSPHVTL 300
301 SATTTDALTV KLKPHEGDTA PLHGYTLHYK PEFGEWETSE VSVDSQKHNI EGLLCGSRYQ 360
361 VYATGFNNIG AGEASDILNT RTKGQKPKLP EKPRFIEVSS NSVSLHFKAW KDGGCPMSHF 420
421 VVESKKRDQI EWNQISNNVK PDNNYVVLDL EPATWYNLRI TAHNSAGFTV AE
|
| Detection Method: | |
| Confidence: | 24.0 |
| Match: | 2v5yA |
| Description: | No description for 2v5yA was found. |
|
Region A: Residues: [1584-1805] |
1 11 21 31 41 51
| | | | | |
1 YDFATLTVTG GTIAPSRDLP ELSAEDTIRI ILSNLNLVVP VVAALLVIII AIIVICILRS 60
61 KGNHHKDDVV YNQTMGPGAT LDKRRPDLRD ELGYIAPPNR KLPPVPGSNY NTCDRIKRGR 120
121 GGLRSNHSTW DPRRNPNLYE ELKAPPVPMH GNHYGHAHGN AECHYRHPGM EDEICPYATF 180
181 HLLGFREEMD PTKAMNFQTF PHQNGHAGPV PGHAGTMLPP GH
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1806-1921] |
1 11 21 31 41 51
| | | | | |
1 PGHVHSRSGS QSMPRANRYQ RKNSQGGQSS IYTPAPEYDD PANCAEEDQY RRYTRVNSQG 60
61 GSLYSGPGPE YDDPANCAPE EDQYGSQYGG PYGQPYDHYG SRGSMGRRSI GSARNP
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1922-2017] |
1 11 21 31 41 51
| | | | | |
1 GNGSPEPPPP PPRNHDMSNS SFNDSKESNE ISEAECDRDH GPRGNYGAVK RSPQPKDQRT 60
61 TEEMRKLIER NETGPKQLQL QQANGAGFTA YDTMAV
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
