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View Structure Prediction Details

Protein: LDHA
Organism: Homo sapiens
Length: 332 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LDHA.

Description E-value Query
Range
Subject
Range
gi|67968888 - gi|67968888|dbj|BAE00801.1| unnamed protein product [Macaca fascicularis]
gi|109107092 - gi|109107092|ref|XP_001084747.1| PREDICTED: lactate dehydrogenase A isoform 6 [Macaca mulatta]
0.0 [1..332] [30..361]
gi|17368677, gi|... - gi|17368677|sp|Q9BE24|LDHA_MACFA L-lactate dehydrogenase A chain (LDH-A) (LDH muscle subunit) (LDH-M...
0.0 [1..332] [1..332]
gi|60823327 - gi|60823327|gb|AAX36640.1| lactate dehydrogenase A [synthetic construct]
0.0 [1..332] [1..332]
gi|62897717 - gi|62897717|dbj|BAD96798.1| lactate dehydrogenase A variant [Homo sapiens]
0.0 [1..332] [1..332]
gi|73988677 - gi|73988677|ref|XP_534084.2| PREDICTED: similar to L-lactate dehydrogenase A chain (LDH-A) (LDH musc...
0.0 [1..332] [30..361]
LDHA_PONAB - L-lactate dehydrogenase A chain OS=Pongo abelii GN=LDHA PE=2 SV=3
LDHA_PONPY - L-lactate dehydrogenase A chain - Pongo pygmaeus (Orangutan)
0.0 [1..332] [1..332]

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Predicted Domain #1
Region A:
Residues: [1-332]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATLKDQLIY NLLKEEQTPQ NKITVVGVGA VGMACAISIL MKDLADELAL VDVIEDKLKG  60
   61 EMMDLQHGSL FLRTPKIVSG KDYNVTANSK LVIITAGARQ QEGESRLNLV QRNVNIFKFI 120
  121 IPNVVKYSPN CKLLIVSNPV DILTYVAWKI SGFPKNRVIG SGCNLDSARF RYLMGERLGV 180
  181 HPLSCHGWVL GEHGDSSVPV WSGMNVAGVS LKTLHPDLGT DKDKEQWKEV HKQVVESAYE 240
  241 VIKLKGYTSW AIGLSVADLA ESIMKNLRRV HPVSTMIKGL YGIKDDVFLS VPCILGQNGI 300
  301 SDLVKVTLTS EEEARLKKSA DTLWGIQKEL QF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 111.0
Match: 1i10A
Description: Lactate dehydrogenase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
malate dehydrogenase activity 7.69241456337154 bayes_pls_golite062009
L-malate dehydrogenase activity 5.35837481826138 bayes_pls_golite062009
lactate dehydrogenase activity 4.66418715735914 bayes_pls_golite062009
malic enzyme activity 2.98382582538724 bayes_pls_golite062009
alcohol dehydrogenase (NAD) activity 2.94416173750168 bayes_pls_golite062009
oxidoreductase activity 2.75947908917144 bayes_pls_golite062009
L-lactate dehydrogenase activity 2.59062377380589 bayes_pls_golite062009
oxidoreductase activity, acting on CH-OH group of donors 2.58076782195922 bayes_pls_golite062009
alcohol dehydrogenase activity, zinc-dependent 2.26153457113968 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor 1.88605255677599 bayes_pls_golite062009
binding 1.76718756313666 bayes_pls_golite062009
catalytic activity 1.67029398049886 bayes_pls_golite062009
protein binding 1.47646217957458 bayes_pls_golite062009
NAD or NADH binding 1.32276254629683 bayes_pls_golite062009
monovalent inorganic cation transmembrane transporter activity 1.22444609393125 bayes_pls_golite062009
retinol dehydrogenase activity 1.16811519855038 bayes_pls_golite062009
oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor 0.91702493082811 bayes_pls_golite062009
transferase activity, transferring acyl groups 0.788034697021177 bayes_pls_golite062009
fatty acid synthase activity 0.714637370305282 bayes_pls_golite062009
hydrogen ion transmembrane transporter activity 0.621273823467575 bayes_pls_golite062009
coenzyme binding 0.59785037604907 bayes_pls_golite062009
DNA binding 0.525227236870065 bayes_pls_golite062009
inorganic cation transmembrane transporter activity 0.523513694229008 bayes_pls_golite062009
nucleic acid binding 0.459537641913493 bayes_pls_golite062009
oxidoreductase activity, acting on the aldehyde or oxo group of donors 0.216422278300306 bayes_pls_golite062009
oxidoreductase activity, acting on NADH or NADPH 0.19685680097448 bayes_pls_golite062009
3-oxoacyl-[acyl-carrier-protein] reductase activity 0.192594057004213 bayes_pls_golite062009
transcription regulator activity 0.177044638410302 bayes_pls_golite062009
malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) activity 0.120195861875768 bayes_pls_golite062009
signal transducer activity 0.0433763403499039 bayes_pls_golite062009
molecular transducer activity 0.0433763403499039 bayes_pls_golite062009
formate dehydrogenase activity 4.92199819939532E-4 bayes_pls_golite062009

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