| Protein: | gi|3694661 |
| Organism: | Homo sapiens |
| Length: | 391 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|3694661.
| Description | E-value | Query Range |
Subject Range |
|
|
2.0E-63 | [164..391] | [178..407] |
|
|
2.0E-63 | [164..391] | [185..414] |
|
|
1.0E-62 | [164..391] | [381..610] |
|
|
2.0E-61 | [164..391] | [175..404] |
|
Region A: Residues: [1-165] |
1 11 21 31 41 51
| | | | | |
1 MSIVRLSVHA KWIMGKVTGT KMQKTAKVRV IRLVLDPHLL KYYNKQKTYF AHNALQQCTI 60
61 GDIVLLKALP VPRTKHVKHE LAEIVFKVGK LVDPVTGKPC AGTTYLESPL SSETTQGVDG 120
121 ASRPSRGPAP CRAGPGARHL RPWPESPRPE PRGLPGPGRG SMATW
|
| Detection Method: |  |
| Confidence: | 12.09691 |
| Match: | 1j5eQ |
| Description: | Ribosomal protein S17 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| structural constituent of ribosome | 7.45319063235379 | bayes_pls_golite062009 |
| structural molecule activity | 6.87843523680097 | bayes_pls_golite062009 |
| nucleic acid binding | 2.69275272183315 | bayes_pls_golite062009 |
| DNA binding | 1.97161900822354 | bayes_pls_golite062009 |
| binding | 1.81248034004657 | bayes_pls_golite062009 |
| RNA binding | 1.76502371106766 | bayes_pls_golite062009 |
| translation regulator activity | 1.46320772716954 | bayes_pls_golite062009 |
| translation factor activity, nucleic acid binding | 1.40718318783582 | bayes_pls_golite062009 |
| translation initiation factor activity | 1.27539679024898 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.83151863389272 | bayes_pls_golite062009 |
| single-stranded DNA binding | 0.72238927168323 | bayes_pls_golite062009 |
| aminoacyl-tRNA ligase activity | 0.474251377131502 | bayes_pls_golite062009 |
| ligase activity, forming carbon-oxygen bonds | 0.47336621289748 | bayes_pls_golite062009 |
| ligase activity, forming aminoacyl-tRNA and related compounds | 0.47336621289748 | bayes_pls_golite062009 |
| transcription regulator activity | 0.157816897728538 | bayes_pls_golite062009 |
| DNA-directed RNA polymerase activity | 0.1542034177713 | bayes_pls_golite062009 |
| RNA polymerase activity | 0.1542034177713 | bayes_pls_golite062009 |
| ribonuclease activity | 0.0760793505650201 | bayes_pls_golite062009 |
|
Region A: Residues: [166-391] |
1 11 21 31 41 51
| | | | | |
1 RRDGRLTGGQ RLLCAGLAGT LSLSLTAPLE LATVLAQVGV VRGHARGPWA TGHRVWRAEG 60
61 LRALWKGNAV ACLRLFPCSA VQLAAYRKFV VLFTDDLGHI SQWSSIMAGS LAGMVSTIVT 120
121 YPTDLIKTRL IMQNILEPSY RGLLHAFSTI YQQEGFLALY RGVSLTVVGA LPFSAGSLLV 180
181 YMNLEKIWNG PRDQFSLPQN FANVCLAAAV TQTLSFPFET VKRKMQ
|
| Detection Method: | |
| Confidence: | 57.69897 |
| Match: | 1okcA |
| Description: | structure of mitochondrial ADP/ATP carrier in complex with carboxyatractyloside |
Matching Structure (courtesy of the PDB): |
|
