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View Structure Prediction Details

Protein: DAL5
Organism: Saccharomyces cerevisiae
Length: 543 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DAL5.

Description E-value Query
Range
Subject
Range
gi|190409620 - gi|190409620|gb|EDV12885.1| allantoate permease [Saccharomyces cerevisiae RM11-1a]
DAL5_YEAST - Allantoate permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DAL5 PE=1 SV=1
DAL5 - Allantoate permease; ureidosuccinate permease; also transports dipeptides, though with lower affinit...
4.0E-89 [1..543] [1..543]
VGLU2_RAT - Vesicular glutamate transporter 2 OS=Rattus norvegicus GN=Slc17a6 PE=1 SV=1
2.0E-77 [55..522] [38..514]
ENSPTRT00000047022 - null
SLC17A6 - solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6
6.0E-77 [55..522] [38..514]
CG4330-PA, FBpp0... - This gene is referred to in FlyBase by the symbol Dmel\CG4330 (CG4330, FBgn0030452). It is a protein...
1.0E-76 [17..523] [1..555]

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Predicted Domain #1
Region A:
Residues: [1-73]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSADASTNSN ASLDEKNLNI TSEAEIKNED VTAEPVLSTV LSPNGKIVYI SDKVDEAMKL  60
   61 AEEAKEIEVT PEE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted functions:

Term Confidence Notes
substrate-specific transmembrane transporter activity 5.46247398538901 bayes_pls_golite062009
ion transmembrane transporter activity 4.58978526526921 bayes_pls_golite062009
transporter activity 4.09176719149278 bayes_pls_golite062009
anion transmembrane transporter activity 3.94605227012838 bayes_pls_golite062009
cation transmembrane transporter activity 3.88180006470231 bayes_pls_golite062009
substrate-specific transporter activity 3.59744164024479 bayes_pls_golite062009
transmembrane transporter activity 3.5865018981083 bayes_pls_golite062009
inorganic anion transmembrane transporter activity 2.52916479889426 bayes_pls_golite062009
organic acid transmembrane transporter activity 2.15783210522667 bayes_pls_golite062009
active transmembrane transporter activity 1.59419818573076 bayes_pls_golite062009
secondary active transmembrane transporter activity 1.22264637452409 bayes_pls_golite062009
polyol transmembrane transporter activity 0.924836669821548 bayes_pls_golite062009
alcohol transmembrane transporter activity 0.924836669821548 bayes_pls_golite062009
binding 0.873217664940684 bayes_pls_golite062009
glycerol transmembrane transporter activity 0.812001619402678 bayes_pls_golite062009
symporter activity 0.74591237387473 bayes_pls_golite062009
solute:cation symporter activity 0.74591237387473 bayes_pls_golite062009
phosphate transmembrane transporter activity 0.312628600969375 bayes_pls_golite062009
cation:sugar symporter activity 0.143419068761182 bayes_pls_golite062009
sugar:hydrogen symporter activity 0.143419068761182 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [74-543]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DRKLRWKIDY CMFPLMCILY AVQFMDKIST SSAAVMGLRT DLKMHGDQYS WVTSAFYFGY  60
   61 LFMNLGPVQF IFQRTSHMSK MLAVFIVIWG MLLALHAAPT VKYPSFIVLR VLLGCAESVV 120
  121 TPCFTIITAQ YWKTEEQFTR VSIWFGMNGL GSILINAIAY GVYIHQDSYA IKGWRTLFVI 180
  181 TGVITIFIGI LIFLWIPDDP SKARFLSKRE KLMVVQRIRS NQQGFGNHEI KKYQIIEALK 240
  241 DVRTWLYFLF TVSSNIPNGG ISSFMSILLN SDFGYSSKET LLMGLPTGAV ELVGCPLFGI 300
  301 LAVYAANKKI PFWKYKLSWA IFAAVLALIA SCMLGFATNS KKARLAGAYL WYISPVSFIC 360
  361 VLSNISANSS GYSKKWTVSS INLVAYAAAN LAGPQTFIAK QAPKYHGAKV AMVVCYAVMI 420
  421 VLLSILLIVN LRENKRRDKI AAERGFPEET ENLEFSDLTD FENPNFRYTL 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 31.69897
Match: 1ja5A_
Description: No description for 1ja5A_ was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle