| Protein: | CDC15 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 974 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CDC15.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..974] | [1..974] |
|
|
0.0 | [4..376] | [1..395] |
|
|
0.0 | [2..410] | [29..442] |
|
|
0.0 | [24..418] | [11..406] |
|
|
0.0 | [11..406] | [6..405] |
|
|
0.0 | [17..455] | [19..463] |
|
|
0.0 | [11..406] | [6..405] |
|
Region A: Residues: [1-101] |
1 11 21 31 41 51
| | | | | |
1 MNSMADTDRV NLTPIQRASE KSVQYHLKQV IGRGSYGVVY KAINKHTDQV VAIKEVVYEN 60
61 DEELNDIMAE ISLLKNLNHN NIVKYHGFIR KSYELYILLE Y
|
| Detection Method: |  |
| Confidence: | 447.218487 |
| Match: | 1f3mC_ |
| Description: | pak1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| phosphotransferase activity, alcohol group as acceptor | 5.49988294224815 | bayes_pls_golite062009 |
| protein kinase activity | 5.4586557943719 | bayes_pls_golite062009 |
| kinase activity | 5.3287080791198 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 4.96052051118534 | bayes_pls_golite062009 |
| protein serine/threonine kinase activity | 4.46381887831481 | bayes_pls_golite062009 |
| calmodulin-dependent protein kinase activity | 4.31938467136214 | bayes_pls_golite062009 |
| transferase activity | 3.97138602499442 | bayes_pls_golite062009 |
| binding | 2.74863538127007 | bayes_pls_golite062009 |
| protein binding | 2.276111749106 | bayes_pls_golite062009 |
| tubulin binding | 2.18641675163967 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 2.12615078788254 | bayes_pls_golite062009 |
| fibroblast growth factor receptor activity | 2.07350687583102 | bayes_pls_golite062009 |
| ATP binding | 1.97600611746091 | bayes_pls_golite062009 |
| adenyl ribonucleotide binding | 1.93596671856664 | bayes_pls_golite062009 |
| adenyl nucleotide binding | 1.90928021591891 | bayes_pls_golite062009 |
| microtubule binding | 1.88110801192607 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 1.65732943334212 | bayes_pls_golite062009 |
| ribonucleotide binding | 1.65726906484847 | bayes_pls_golite062009 |
| purine nucleotide binding | 1.63763394711025 | bayes_pls_golite062009 |
| nucleotide binding | 1.63195828048121 | bayes_pls_golite062009 |
| fibroblast growth factor binding | 1.46046123990071 | bayes_pls_golite062009 |
| JUN kinase kinase kinase activity | 1.41172362253967 | bayes_pls_golite062009 |
| protein tyrosine kinase activity | 1.3898059094397 | bayes_pls_golite062009 |
| receptor signaling protein serine/threonine kinase activity | 1.38496328649031 | bayes_pls_golite062009 |
| actin binding | 1.33479685165255 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 1.32254739984688 | bayes_pls_golite062009 |
| gamma-tubulin binding | 1.28511591054866 | bayes_pls_golite062009 |
| receptor signaling protein activity | 1.27291233344322 | bayes_pls_golite062009 |
| catalytic activity | 1.21655087018101 | bayes_pls_golite062009 |
| fibroblast growth factor 1 binding | 1.0383359654359 | bayes_pls_golite062009 |
| cyclin-dependent protein kinase activity | 0.959360414036299 | bayes_pls_golite062009 |
| MAP kinase activity | 0.81943579965027 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 0.612883428421652 | bayes_pls_golite062009 |
| transporter activity | 0.595111702412257 | bayes_pls_golite062009 |
| insulin receptor substrate binding | 0.57867852584301 | bayes_pls_golite062009 |
| protein serine/threonine/tyrosine kinase activity | 0.48345772948903 | bayes_pls_golite062009 |
| enzyme binding | 0.46284745266176 | bayes_pls_golite062009 |
| transmembrane transporter activity | 0.41384976209545 | bayes_pls_golite062009 |
| magnesium ion binding | 0.393328812780268 | bayes_pls_golite062009 |
| MAP kinase kinase kinase activity | 0.37115026509016 | bayes_pls_golite062009 |
| MAP kinase kinase activity | 0.35402045013148 | bayes_pls_golite062009 |
| protein complex binding | 0.343240719858581 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.318153468064373 | bayes_pls_golite062009 |
| signal transducer activity | 0.270054246024761 | bayes_pls_golite062009 |
| molecular transducer activity | 0.270054246024761 | bayes_pls_golite062009 |
| actin filament binding | 0.2403700250846 | bayes_pls_golite062009 |
| ubiquitin-protein ligase activity | 0.114318824149111 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.0922946791401962 | bayes_pls_golite062009 |
| transmembrane receptor protein kinase activity | 0.0556163711947139 | bayes_pls_golite062009 |
| transmembrane receptor activity | 0.00652065412910241 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.0040394359628233 | bayes_pls_golite062009 |
|
Region A: Residues: [102-347] |
1 11 21 31 41 51
| | | | | |
1 CANGSLRRLI SRSSTGLSEN ESKTYVTQTL LGLKYLHGEG VIHRDIKAAN ILLSADNTVK 60
61 LADFGVSTIV NSSALTLAGT LNWMAPEILG NRGASTLSDI WSLGATVVEM LTKNPPYHNL 120
121 TDANIYYAVE NDTYYPPSSF SEPLKDFLSK CFVKNMYKRP TADQLLKHVW INSTENVKVD 180
181 KLNKFKEDFT DADYHWDADF QEEKLNISPS KFSLRAAPAP WAENNQELDL MPPTESQLLS 240
241 QLKSSS
|
| Detection Method: | |
| Confidence: | 447.218487 |
| Match: | 1f3mC_ |
| Description: | pak1 |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [348-864] |
1 11 21 31 41 51
| | | | | |
1 KPLTDLHVLF SVCSLENIAD TIIECLSRTT VDKRLITAFG SIFVYDTQHN HSRLRLKFIA 60
61 MGGIPLIIKF EHLAKEFVID YPQTLIECGI MYPPNFASLK TPKYILELVY RFYDLTSTAF 120
121 WCRWCFKHLD ISLLLNNIHE RRAQSILLKL SSYAPWSFEK ILPSLIDSKL KKKILISPQI 180
181 TYVVFKSINY MITTNDDKIH KSAIPSSSSL PLSSSPTRNS PVNSVQSPSR SPVHSLMATR 240
241 PSSPMRHKSI SNFPHLTISS KSRLLIELPE GFFTWLTSFF VDMAQIKDLS VLKYFTKLCY 300
301 LTVHINSTFL NDLLDNDAFF AFIRNIDTII PFIDDAKTAA FIWKQITAIC VEMSLDMDQM 360
361 SASLFSTAMN FIRKKNNTSI SGLEIILNCL HFTLRNVNDD VAPTVGSSES HSVFLIKVNN 420
421 DAAIELPIDQ LVDLFYALND DDVNLSKLIS IFTKICSLPG FENLTINIIF HPNFYEKIVS 480
481 FFDTYFNSLL IQIDLLKFIK LIFSKSLLKL YDYTGQP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [865-974] |
1 11 21 31 41 51
| | | | | |
1 DPIKQTEPNR RNKATVFKLR AILVQITEFL NNNWNNGCPK RNSNQVGGDS VLICQLCEDI 60
61 RSLSKKGSLQ KVSSVTAAIG SSPTKDERSN LRSSKDKSDG FSVPITTFQT
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [758-871] |
1 11 21 31 41 51
| | | | | |
1 HSVFLIKVNN DAAIELPIDQ LVDLFYALND DDVNLSKLIS IFTKICSLPG FENLTINIIF 60
61 HPNFYEKIVS FFDTYFNSLL IQIDLLKFIK LIFSKSLLKL YDYTGQPDPI KQTE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [872-974] |
1 11 21 31 41 51
| | | | | |
1 PNRRNKATVF KLRAILVQIT EFLNNNWNNG CPKRNSNQVG GDSVLICQLC EDIRSLSKKG 60
61 SLQKVSSVTA AIGSSPTKDE RSNLRSSKDK SDGFSVPITT FQT
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
