| Protein: | gi|123994479, gi... |
| Organism: | synthetic construct |
| Length: | 508 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|123994479, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..508] | [1..508] |
|
|
0.0 | [1..508] | [1..508] |
|
|
0.0 | [1..508] | [1..508] |
|
|
0.0 | [1..508] | [1..508] |
|
|
0.0 | [1..508] | [1..508] |
|
|
0.0 | [1..508] | [1..508] |
|
|
0.0 | [1..508] | [1..508] |
|
Region A: Residues: [1-117] |
1 11 21 31 41 51
| | | | | |
1 MADGQVAELL LRRLEASDGG LDSAELAAEL GMEHQAVVGA VKSLQALGEV IEAELRSTKH 60
61 WELTAEGEEI AREGSHEARV FRSIPPEGLA QSELMRLPSG KVGFSKAMSN KWIRVDK
|
| Detection Method: |  |
| Confidence: | 1.6 |
| Match: | 1p4xA |
| Description: | Staphylococcal accessory regulator A homolog, SarS |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 3.09413019441785 | bayes_pls_golite062009 |
| nucleic acid binding | 2.8293727459515 | bayes_pls_golite062009 |
| DNA binding | 2.66906990480864 | bayes_pls_golite062009 |
| binding | 2.53822896550273 | bayes_pls_golite062009 |
| ligase activity | 2.33035084655874 | bayes_pls_golite062009 |
| transcription factor activity | 2.21460392371094 | bayes_pls_golite062009 |
| structural constituent of ribosome | 0.764002516817766 | bayes_pls_golite062009 |
| structural molecule activity | 0.756450227832198 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.665091289283954 | bayes_pls_golite062009 |
| protein binding | 0.626618806841206 | bayes_pls_golite062009 |
| transcription activator activity | 0.542530812773621 | bayes_pls_golite062009 |
| transcription repressor activity | 0.423955395883599 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 0.0907538697485439 | bayes_pls_golite062009 |
|
Region A: Residues: [118-508] |
1 11 21 31 41 51
| | | | | |
1 SAADGPRVFR VVDSMEDEVQ RRLQLVRGGQ AEKLGEKERS ELRKRKLLAE VTLKTYWVSK 60
61 GSAFSTSISK QETELSPEMI SSGSWRDRPF KPYNFLAHGV LPDSGHLHPL LKVRSQFRQI 120
121 FLEMGFTEMP TDNFIESSFW NFDALFQPQQ HPARDQHDTF FLRDPAEALQ LPMDYVQRVK 180
181 RTHSQGGYGS QGYKYNWKLD EARKNLLRTH TTSASARALY RLAQKKPFTP VKYFSIDRVF 240
241 RNETLDATHL AEFHQIEGVV ADHGLTLGHL MGVLREFFTK LGITQLRFKP AYNPYTEPSM 300
301 EVFSYHQGLK KWVEVGNSGV FRPEMLLPMG LPENVSVIAW GLSLERPTMI KYGINNIREL 360
361 VGHKVNLQMV YDSPLCRLDA EPRPPPTQEA A
|
| Detection Method: | |
| Confidence: | 78.0 |
| Match: | 1b70A |
| Description: | Phenyl-tRNA synthetase (PheRS) alpha subunit, PheS |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| phenylalanine-tRNA ligase activity | 13.8919118344182 | bayes_pls_golite062009 |
| ligase activity, forming carbon-oxygen bonds | 12.5698315343202 | bayes_pls_golite062009 |
| ligase activity, forming aminoacyl-tRNA and related compounds | 12.5698315343202 | bayes_pls_golite062009 |
| aminoacyl-tRNA ligase activity | 12.5592545638101 | bayes_pls_golite062009 |
| ligase activity | 6.92073480193262 | bayes_pls_golite062009 |
| glycine-tRNA ligase activity | 2.61548498770105 | bayes_pls_golite062009 |
| threonine-tRNA ligase activity | 2.18642354927 | bayes_pls_golite062009 |
| serine-tRNA ligase activity | 2.07594942154162 | bayes_pls_golite062009 |
| catalytic activity | 1.99372273395202 | bayes_pls_golite062009 |
| alanine-tRNA ligase activity | 1.82594054955281 | bayes_pls_golite062009 |
| lysine-tRNA ligase activity | 1.72324031407565 | bayes_pls_golite062009 |
| histidine-tRNA ligase activity | 1.72215103383322 | bayes_pls_golite062009 |
| asparagine-tRNA ligase activity | 0.921492123574877 | bayes_pls_golite062009 |
| binding | 0.705666054154871 | bayes_pls_golite062009 |
| aspartate-tRNA ligase activity | 0.00572514744734753 | bayes_pls_golite062009 |
