| Protein: | ent-3 |
| Organism: | Caenorhabditis elegans |
| Length: | 729 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ent-3.
| Description | E-value | Query Range |
Subject Range |
|
|
281.0 | [0..17] | [267..539] |
|
Region A: Residues: [1-93] |
1 11 21 31 41 51
| | | | | |
1 MPSTKDRQAL CKKCKKGIAT KSSRASKRLR SSKSTRSRKS VKPSKSNKKA ENEKKRQVLR 60
61 NWITRKRREF NNEDSSSQTT SKIPKRAILF CVM
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [94-271] |
1 11 21 31 41 51
| | | | | |
1 TDTVKEKSAL CAIIATKRKR TKKNNKPIQI IAELRMSTKF HFKRVFEIVE KMCREQGIDD 60
61 IDDHSYLLEV KSVNAFEGNS FSLAAGIALY AVCSGTTVKN ETIVIGKLDK TGNIEWDEYA 120
121 EEEVKHAIKH NFQQVLMPFT NLPHVSEEHK QAIDCNGIRT FKDALELMVV HPSSMQRH
|
| Detection Method: | |
| Confidence: | 58.39794 |
| Match: | 1rr9A |
| Description: | Catalytic domain of E.coli Lon protease |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.06355800505512 | bayes_pls_golite062009 |
| catalytic activity | 0.878454819018611 | bayes_pls_golite062009 |
| structural constituent of ribosome | 0.804251312253629 | bayes_pls_golite062009 |
| ribonuclease activity | 0.75307991342421 | bayes_pls_golite062009 |
| nucleic acid binding | 0.728838449772752 | bayes_pls_golite062009 |
| nuclease activity | 0.69721312877891 | bayes_pls_golite062009 |
| structural molecule activity | 0.653141443225757 | bayes_pls_golite062009 |
| ATPase activity | 0.652243617710716 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.608970207047375 | bayes_pls_golite062009 |
| pyrophosphatase activity | 0.540936026536059 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 0.523648791725881 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 0.520758768874988 | bayes_pls_golite062009 |
| transcription regulator activity | 0.506031376391446 | bayes_pls_golite062009 |
| 3'-5'-exoribonuclease activity | 0.48105441429954 | bayes_pls_golite062009 |
| 3'-5' exonuclease activity | 0.477960254167 | bayes_pls_golite062009 |
| DNA binding | 0.413758080397896 | bayes_pls_golite062009 |
| hydrolase activity | 0.405362480272149 | bayes_pls_golite062009 |
| ATPase activity, coupled | 0.392367832041496 | bayes_pls_golite062009 |
| exoribonuclease activity, producing 5'-phosphomonoesters | 0.36703663415044 | bayes_pls_golite062009 |
| exoribonuclease activity | 0.350394896843651 | bayes_pls_golite062009 |
| protein binding | 0.214066724623027 | bayes_pls_golite062009 |
|
Region A: Residues: [272-729] |
1 11 21 31 41 51
| | | | | |
1 NAGADDVSTN DYDTFVEKSV KHTKSPESIE SGSITDQNIT DTDEVKDLGN YVFFIFMMFG 60
61 FGALLPWNMF LNISFDYYTM FKLRSADGNA TWYSSNFQNS MTISAQIPSL VFSVINIFIA 120
121 VKGDLTRGMK ICLIVVQLMV IVTVVFIYID TSTWIATFSM LTLGTIVVLN AANGLFQNSM 180
181 FGLASPFPFK YTNAVIIGQN FCGTAVTVLS MLTKAASDDV QMRASLFFGL SSVAVVVCFI 240
241 LLNFLKRLAF YKKFGILRTS SQSDEEGISS WESVKLAFEK SKMQFANIFV LFFVTLALFP 300
301 NVCMYVKDAK KGELHSFVVP EKYFMDVVTF LNFNLFAFLG SLMANWIRFP GPNTVWICVA 360
361 ARFWFMFYFP AANYHPMDFP RAYPVLFEST WLFAFNICIF ALTSGYLSSL IMMYAPRSHE 420
421 DPKIQRMAGM IASFFLIFGI VAGLVFSWQI RLFMTGYA
|
| Detection Method: | |
| Confidence: | 39.0 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transporter activity | 4.09176719149278 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.59744164024479 | bayes_pls_golite062009 |
| transmembrane transporter activity | 3.5865018981083 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 3.54194478414824 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 2.21266150105753 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 1.79369588808394 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 1.59419818573076 | bayes_pls_golite062009 |
| binding | 1.45862166005114 | bayes_pls_golite062009 |
| secondary active transmembrane transporter activity | 1.22264637452409 | bayes_pls_golite062009 |
| polyol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| alcohol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| glycerol transmembrane transporter activity | 0.812001619402678 | bayes_pls_golite062009 |
| symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| solute:cation symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| sugar:hydrogen symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
| cation:sugar symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
