YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: ATG17_YEAST
Organism: Saccharomyces cerevisiae S288c
Length: 417 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ATG17_YEAST.

Description E-value Query
Range
Subject
Range
ATG17_YEAST - Autophagy-related protein 17 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ATG17 PE=1 ...
ATG17 - Scaffold protein responsible for phagophore assembly site organization; regulatory subunit of an aut...
gi|207342702 - gi|207342702|gb|EDZ70384.1| YLR423Cp-like protein [Saccharomyces cerevisiae AWRI1631]
0.0 [1..417] [1..417]
gi|25463383, gi|... - gi|3859702|emb|CAA21977.1| unknown hypothetical protein [Candida albicans], pir||T52157 hypothetical...
5.0E-86 [1..393] [10..424]
SPAC10F6.11c - kinase activator
ATG17_SCHPO - Autophagy-related protein 17 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=atg17 PE=2 SV...
2.0E-83 [8..402] [76..439]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
3.0E-73 [65..381] [150..470]
PPFIA1 - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), al...
3.0E-60 [136..383] [191..440]

Back

Predicted Domain #1
Region A:
Residues: [1-255]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNEADVTKFV NNARKTLTDA QLLCSSANLR IVDIKKKLSS WQLSISKLNF LIVGLRQQGK  60
   61 FLYTILKEGI GTKLIQKQWN QAVLVVLVDE MKYWQYEITS KVQRLDGIVN ELSISEKDDT 120
  121 DPSKLGDYIS RDNVNLLNDK LKEVPVIERQ IENIKLQYEN MVRKVNKELI DTKLTDVTQK 180
  181 FQSKFGIDNL METNVAEQFS RELTDLEKDL AEIMNSLTQH FDKTLLLQDK KIDNDEREEL 240
  241 FKVVQGDDKE LYNIF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 13.09691
Match: 1gojA_
Description: Kinesin
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 2.00548409930693 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides 1.85030653553169 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 1.84811666933472 bayes_pls_golite062009
hydrolase activity 1.65763522573119 bayes_pls_golite062009
ribonucleotide binding 1.53142082854758 bayes_pls_golite062009
purine nucleotide binding 1.52938239070386 bayes_pls_golite062009
purine ribonucleotide binding 1.52887308780164 bayes_pls_golite062009
nucleotide binding 1.52746968836881 bayes_pls_golite062009
ATP binding 1.23942044024113 bayes_pls_golite062009
adenyl ribonucleotide binding 1.21044170258803 bayes_pls_golite062009
adenyl nucleotide binding 1.19481945569892 bayes_pls_golite062009
catalytic activity 1.00104173493322 bayes_pls_golite062009
hydrogen ion transporting ATP synthase activity, rotational mechanism 0.8469248456592 bayes_pls_golite062009
nucleic acid binding 0.836040413405389 bayes_pls_golite062009
DNA-dependent ATPase activity 0.70364355116614 bayes_pls_golite062009
motor activity 0.677658554107 bayes_pls_golite062009
kinase activity 0.641541011250583 bayes_pls_golite062009
pyrophosphatase activity 0.540750418412449 bayes_pls_golite062009
nucleoside-triphosphatase activity 0.517457589081898 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 0.40876498215632 bayes_pls_golite062009
DNA binding 0.408392463724354 bayes_pls_golite062009
protein binding 0.170837278876362 bayes_pls_golite062009
hydrogen ion transmembrane transporter activity 0.156278588350022 bayes_pls_golite062009
transcription regulator activity 0.117610930471173 bayes_pls_golite062009
microtubule motor activity 0.11674780318211 bayes_pls_golite062009
protein kinase activity 0.0646123847220056 bayes_pls_golite062009
helicase activity 0.0543669010112849 bayes_pls_golite062009
monovalent inorganic cation transmembrane transporter activity 0.0223627159838333 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [256-417]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KTLHEVIDDV DKTILNLGQF LQAKIKEKTE LHSEVSEIIN DFNRNLEYLL IFKDISNLID  60
   61 SFKNSCTQDI QTTKELCEFY DNFEESYGNL VLEAKRRKDV ANRMKTILKD CEKQLQNLDA 120
  121 QDQEERQNFI AENGTYLPET IWPGKIDDFS SLYTLNYNVK NP

[Run NCBI BLAST on this sequence.]

Detection Method: ORFEUS
Confidence: 8.03
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle