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View Structure Prediction Details

Protein: gi|110743267, gi...
Organism: Arabidopsis thaliana
Length: 257 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|110743267, gi....

Description E-value Query
Range
Subject
Range
gi|7487290, gi|2... - pir||T01111 hypothetical protein At2g32960 [imported] - Arabidopsis thaliana, gi|2702271|gb|AAB91974...
255.0 [0..8] [257..1]

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Predicted Domain #1
Region A:
Residues: [1-257]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLIEKTMSM NQFRTMEEEK QDGGELFHTI EVAKVDRNNV SQPPPAATAA LLEVPGDELN  60
   61 LIPPLNFSMV DNGIFRSGFP DSANFSFIKT LGLRSIISLC PEPYPENNMQ FLKSNGISLF 120
  121 QFGIEGSKSK CLPGLENEVW LHIWSSKHQK EDFYTNGNSK TSEPFVDILD QKIREALKVL 180
  181 LDEKNHPLLI HCKRGKHRTG CLVGCMRKLQ KWCITSILDE YKRFAAAKAR VSDQRFLESF 240
  241 DVSGLKHTPM SFSCSNR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 48.09691
Match: 1xriA
Description: X-ray structure of a putative phosphoprotein phosphatase from Arabidopsis thaliana gene AT1G05000
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
phosphoprotein phosphatase activity 7.30669036331612 bayes_pls_golite062009
phosphatase activity 6.6585143972081 bayes_pls_golite062009
phosphoric ester hydrolase activity 6.44546424348532 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 5.56007278295923 bayes_pls_golite062009
protein tyrosine phosphatase activity 5.3097342170423 bayes_pls_golite062009
hydrolase activity 4.08088661270715 bayes_pls_golite062009
transmembrane receptor protein phosphatase activity 2.94635032478625 bayes_pls_golite062009
transmembrane receptor protein tyrosine phosphatase activity 2.94635032478625 bayes_pls_golite062009
protein tyrosine/serine/threonine phosphatase activity 2.77531895423367 bayes_pls_golite062009
protein serine/threonine phosphatase activity 1.95004535887255 bayes_pls_golite062009
binding 1.94343241290871 bayes_pls_golite062009
protein binding 1.2114562222518 bayes_pls_golite062009
inositol or phosphatidylinositol phosphatase activity 1.1200449509328 bayes_pls_golite062009
catalytic activity 1.06283028154109 bayes_pls_golite062009
lipid phosphatase activity 1.05085928819585 bayes_pls_golite062009
nucleic acid binding 0.766259791679226 bayes_pls_golite062009
DNA binding 0.744259483210066 bayes_pls_golite062009
non-membrane spanning protein tyrosine phosphatase activity 0.724257798127697 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 0.0776644624761281 bayes_pls_golite062009
kinase activity 0.0715870881653981 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle